Xylanibacter ruminicola: PRU_0293
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Entry
PRU_0293 CDS
T01212
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
pru
Xylanibacter ruminicola
Pathway
pru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PRU_0293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pru03400
]
PRU_0293
DNA repair and recombination proteins [BR:
pru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PRU_0293
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
Rad17
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADE81309
UniProt:
D5EWC6
LinkDB
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Position
353832..356405
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AA seq
857 aa
AA seq
DB search
MIYPNNFERKLGFDEIRRLLKARCQSTLGQEKVDEMAFSVDADVVNEWLTQVREFRRLTA
EHDDFPMQYFFDVRESIARIRLENTHLEEDEVWDLRRSLETIANIVRFLQRDGDEKPNGE
VVYPYPALYRLTDGVATFPAMIRRIDSILDKFGKVKDSASMTLAGIRHDLEKTQGSISRT
LYTILHAAQRDGLVDKDAAPAMRDGRLVIPVAPQVKRRINGIVHDESATGKTVFIEPTEV
VEANNKVRQLEAEERREVIRILTVFTDEVRPHVREIIDSYQLLAMIDLIQAKAKWAELTL
AFEPTVKAEPVIDWIRAIHPLLQLSLEKKGGHVVPLDIMLNRAKRLLLISGPNAGGKSVC
LKTVGLLQYMLQCGLPVPIGDRSTAGIFESIMIDIGDEQSIENDLSTYSSHLMNMKQMMK
QAGERSLLLIDEFGSGTEPAIGGAIAEAMLKQFWKKRTFGVITTHYQNLKHFADDHEGVV
NGAMLYDRHEMQALFQLSIGQPGSSFAIEIARKTGIPEEVIKDASDIVGQDYIQSDKYLQ
DIVRDKRYWEGKRQTIHQHEKKLQASGERLEAAVEEIEAERKAILRKAREQAEELLRESN
KKIENAIREIREAQAEKERTRKIREELDTFKEELAQVDTRATDEAIAKKMRQIQERKERR
EKRKAEKLSKKEEGGKREDAAAVASAQSSKANIPLQKGDTVRIKGLTSVGVIDSIDGGKA
VVVFGGMKTKMRLERLEHAEKPKEQQTKAEERNSNIAGSYGVVSKDTRNVIDNRKLNFKQ
DIDVRGMRGDEAINAITYFIDDAILVGVSRVRILHGTGTGILRQLIRQYLGTIPNVSHYR
DEHVQFGGAGITVVDLE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
gtgatttatccaaataactttgagcgtaagctcggattcgatgagattcgtaggttgctg
aaggcacgttgccagagcaccttggggcaggagaaagtcgacgaaatggctttctcggtt
gatgccgatgtagtaaatgaatggttaacgcaggtgcgcgagttccgtaggttgactgcc
gaacacgatgattttcccatgcaatacttctttgatgtgcgcgagagcattgcgcgcata
cgattggagaatacccatcttgaagaggatgaggtgtgggatttgcgtcgctcgttggaa
acaattgccaacattgtgcgctttttgcagcgcgatggcgacgagaaacctaacggcgag
gtggtgtatccgtatccggccctgtaccgtttaactgatggcgtggctaccttccccgct
atgattcgtcgtatcgactctattctggataaatttggtaaggtaaaggattcggcctcg
atgacgctggctggtatccgtcacgacttagagaaaacgcagggtagtatctcgcgtaca
ttatatactatattgcatgcggcccagcgcgatgggttggtagataaggatgctgccccc
gctatgcgtgacggacgactggtgataccagtggctccacaggtaaagcgccgtattaac
ggtattgtgcacgatgagagtgctactggtaagacggtgtttattgagccgaccgaagtg
gttgaggcaaacaataaggtgcgacagctggaggctgaggagcgtcgtgaggtgattcgt
attctgacggtatttactgatgaggtacgcccgcacgtgcgcgagataatcgactcgtat
cagctgttggctatgatcgacctgattcaggccaaggccaagtgggctgagctgactctg
gcttttgaaccaaccgtaaaggccgaacctgttatcgactggattcgtgccatccatccc
ttgctgcagctctcgctggagaagaagggtgggcatgtggtgcctctggatattatgctg
aaccgtgcaaagcgactgctgcttatcagtggtcctaatgctggtggtaaatcggtatgc
ctgaaaacggttggcttgctgcagtatatgttgcagtgcggcttgcctgttcctatcggt
gatcgctctaccgcaggtatcttcgagagtatcatgattgatatcggcgatgagcagagc
atcgagaacgatctgagtacctactcgagtcatctgatgaacatgaagcagatgatgaaa
caggctggcgagcgctcgctgttgctgatagatgagtttggtagcggtaccgagcccgcc
attggtggtgctattgccgaggccatgctgaagcagttctggaagaagcgtacctttggt
gtgattaccactcactatcagaacctgaagcattttgccgacgatcacgagggtgtggtg
aatggcgccatgctgtacgaccgacatgagatgcaggccttgttccagctgtcgattggt
cagcctggttcgagctttgccatcgagattgcccgtaagacgggtatccccgaagaggtg
attaaggatgccagtgatatcgtgggtcaggattatatccagagtgataaatacctgcag
gatattgtgcgcgataagcgttactgggaaggtaagcgacagactatccaccagcacgag
aagaaactgcaggccagtggtgagcgcttggaggctgctgtagaagagattgaagcagag
cgcaaggctattctgcgcaaggcccgagagcaggccgaggaactgttgcgcgagagtaat
aagaagatagaaaacgccatccgtgagatacgtgaggcccaggccgagaaggagcgtacc
cgcaagattcgcgaggaactggatacctttaaggaggagctggctcaggttgatacccgt
gctactgatgaagccattgccaagaagatgcgccagattcaggagcgtaaggagcgcaga
gagaaacgtaaggccgagaagctttcgaagaaagaggaaggtggaaagcgagaggatgcc
gcagctgtagcaagtgctcagtcctcaaaggctaacataccactccagaaaggcgatacc
gtgcgtatcaagggtcttaccagcgtgggtgttatcgatagtatcgatggcggaaaggct
gtggtagtatttggtggtatgaaaaccaagatgcgcctggagcgcctggagcatgccgag
aaacccaaggagcagcagaccaaggccgaggaacgtaacagcaatattgctggctcgtat
ggtgtggtatcgaaggatactcgcaatgtgattgataatcgaaaactgaactttaaacaa
gatatagatgtgcgcggtatgcgtggcgacgaggctattaatgccattacctattttata
gacgatgctatactggtaggagtgagtcgtgtacgcattctgcatggtaccggaacaggt
attctgcgccagttaatccgacagtatctgggcactattcctaacgtttcgcactaccgc
gacgagcatgtgcagtttggtggtgcaggcatcactgttgtggatttagaataa
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