Xylanibacter ruminicola: PRU_0307
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Entry
PRU_0307 CDS
T01212
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRU_0307 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pru03019
]
PRU_0307 (groL)
03110 Chaperones and folding catalysts [BR:
pru03110
]
PRU_0307 (groL)
03029 Mitochondrial biogenesis [BR:
pru03029
]
PRU_0307 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pru04147
]
PRU_0307 (groL)
Enzymes [BR:
pru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PRU_0307 (groL)
Messenger RNA biogenesis [BR:
pru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PRU_0307 (groL)
Chaperones and folding catalysts [BR:
pru03110
]
Heat shock proteins
HSP60 / Chaperonin
PRU_0307 (groL)
Mitochondrial biogenesis [BR:
pru03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PRU_0307 (groL)
Exosome [BR:
pru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PRU_0307 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PRU_0307 (groL)
Exosomal proteins of breast cancer cells
PRU_0307 (groL)
Exosomal proteins of colorectal cancer cells
PRU_0307 (groL)
Exosomal proteins of bladder cancer cells
PRU_0307 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
ARM_KNTC1_3rd
Motif
Other DBs
NCBI-ProteinID:
ADE83451
UniProt:
D5EWS5
LinkDB
All DBs
Position
372067..373698
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFNIEARDAMKQGVDQLANAVKVTLGPKGRNVVIEKKFGAPQITKDGVSVAKEIE
LEDKFENTGAQLVKSVASKTGDDAGDGTTTATILAQAIVSEGLKNVTAGANPMDLKRGID
KAVKAVTEHIAKSAEQVGDNYDKIEQVATVSANNDKEIGELLAEAMRKVSKDGVITIEES
KSRDTHIGVVEGMQFDRGYLSAYFITDSEKMECVMENPYILIYDKKISNIKDFLPILQPA
AESGRPLLVIAEDVDSEALTTLVVNRLRGGLKICAVKAPGFGDRRKAMLEDIATLTGGVV
ISEEKGLKLEQATLEMLGTCDKVTVSKDNTTIVNGAGDKQAIQDRIAQIKKEIENTTSSY
DKEKLQERLAKLAGGVAVLYVGANSEVEMKEKKDRVDDALCATRAAIEEGVVAGGGTTYI
RAQEALKNVKGDNADEQTGINIICRAIEEPLRQIVTNAGGEGAVVVQKVREGKGDFGYNA
RLDKYEDLREAGVIDPAKVARVALENAASIAGMFLTTECIICDKPEKEPAMPMAGAPGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatatcaaattcaatattgaggcccgcgatgctatgaagcagggtgtggac
cagttggcaaatgcagtaaaggtaacacttggtcctaagggccgcaacgtggttatcgag
aagaagttcggtgctcctcagatcactaaggatggtgtatctgtagctaaggagattgag
ctcgaggataagttcgagaacacaggtgctcagctcgttaagagcgtagcttcaaagact
ggcgacgacgctggtgacggtacaactacagctaccatcctggctcaggctatcgtatca
gagggcttgaagaacgttaccgctggtgctaaccccatggacctgaagcgtggtatcgac
aaggctgttaaggctgttactgagcacattgctaagagcgccgagcaggttggcgacaac
tacgataagatcgagcaggtagctaccgtatctgccaacaacgataaggagattggtgag
ctgctggccgaggctatgcgtaaggtatctaaggatggtgtgatcactatcgaggagagc
aagagccgcgacacacacattggtgtagttgagggtatgcagttcgatcgtggttacctg
tcagcttacttcatcaccgatagcgagaagatggagtgcgtgatggagaacccatacatc
ctgatttacgataagaagatttcaaacatcaaggatttcctgcctattttgcagcctgct
gccgagagcggacgccccttgctggtaatcgccgaggatgttgattctgaggctcttacc
acactggtagtaaaccgtctgcgtggtggtctgaagatctgtgctgttaaggctcctggc
tttggcgatcgccgtaaggccatgctcgaggatatcgctacacttactggtggcgtagtt
atcagcgaggagaagggcttgaagcttgagcaggctacactcgagatgctgggtacttgc
gataaggtaaccgtaagcaaggataacaccactatcgttaacggtgctggcgacaagcag
gccattcaggatcgtatcgctcagattaagaaggagatcgagaatacaacctcgtcttac
gataaggagaagctgcaggagcgcctggctaagttggctggtggcgtagcagtactctac
gtaggtgctaactctgaggttgagatgaaggagaagaaggatcgtgtcgacgatgctctc
tgcgctacccgtgctgccatcgaggaaggtgttgtagctggtggtggtacaacctacatc
cgcgctcaggaggctctgaagaacgtgaagggcgacaatgccgacgagcagacaggtatc
aacatcatctgccgtgctatcgaggagcctctgcgccagattgttaccaacgctggtggc
gagggtgccgtagtagttcagaaggttcgcgagggtaagggcgacttcggttacaatgcc
cgtctcgacaagtacgaggatctgcgcgaggcaggagttatcgatcctgctaaggtggcc
cgtgttgcactcgagaatgccgcttcaatcgccggtatgttccttactaccgagtgcatt
atttgcgacaaacccgagaaggagcccgctatgccaatggcaggtgcaccaggcatgggt
ggcatgatgtaa
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