Xylanibacter ruminicola: PRU_0331
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Entry
PRU_0331 CDS
T01212
Name
(GenBank) RNA polymerase sigma-70 factor family protein
KO
K03086
RNA polymerase primary sigma factor
Organism
pru
Xylanibacter ruminicola
Pathway
pru02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PRU_0331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pru03021
]
PRU_0331
Transcription machinery [BR:
pru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PRU_0331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r1_2
Sigma70_r2
HTH_36
Bot1p
HTH_47
Motif
Other DBs
NCBI-ProteinID:
ADE81937
UniProt:
D5EWU6
LinkDB
All DBs
Position
complement(400710..401432)
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AA seq
240 aa
AA seq
DB search
MHHLLENHAEGFNVYLEQIENNQPLTMEEEQELGRRIMAGDTTARNKLIEANLRFVLTCA
IDMATPFVPIEELIAAGNYGLTIAAARYNPSFDNHFCSYAVHHIRRAISEAIRTWTCSVK
TPNLLLGLQACLSLDDCHDTDDDNWSRDLIDRIPAAPLSSEMLRDFEETKEGLRSFLSKW
YYPSDVNLMMDLAQMVYDGYSVSDLAKKYGLPIRRMKAIIADLREKAILHQLQKAYAKAA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacctccttgagaatcatgccgaaggtttcaacgtctaccttgagcaaatcgag
aacaatcagcctctcactatggaagaagagcaggaactgggccgccgcatcatggcaggc
gacaccactgctcgcaacaagctcatcgaagccaacctgcgctttgtactcacctgcgcc
atcgacatggccactcccttcgtacccatcgaggaactcatcgcagctggcaactacggt
ctgaccatagcagctgcacgctacaacccttcattcgataatcacttctgctcatatgcg
gtacaccacatccgcagagccatcagcgaggccatcaggacctggacatgttccgtcaag
acccccaatctccttctggggcttcaggcctgtctgtcgcttgacgactgtcacgataca
gatgatgacaactggagccgcgaccttatagaccgcatacccgctgcaccattgagcagt
gaaatgcttcgcgactttgaggaaaccaaggaggggctgcgctctttcctaagtaagtgg
tactatcccagcgatgtaaacctgatgatggacttggcacagatggtgtatgacgggtat
tccgtttccgaccttgccaagaagtacgggctgcccatcaggagaatgaaggccatcatt
gccgaccttcgcgagaaggctattctgcaccaactgcagaaggcctacgcaaaggcggcg
taa
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