Xylanibacter ruminicola: PRU_0402
Help
Entry
PRU_0402 CDS
T01212
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru00730
Thiamine metabolism
pru01100
Metabolic pathways
pru01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PRU_0402 (thiC)
Enzymes [BR:
pru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PRU_0402 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Hia_Tpr_ring_dom
Motif
Other DBs
NCBI-ProteinID:
ADE82207
UniProt:
D5EX09
LinkDB
All DBs
Position
486838..488424
Genome browser
AA seq
528 aa
AA seq
DB search
MINDHKAYAQREKAYMQGNLYPDVKVGMTKVNLTPTVTKDADGKTHVEKNEPVYIYDTSG
PYTDPNYTVDLKKGLPPMRQQWIADRAQKGQGITQMACAKAGIITPEMEYVAIRENMNCQ
ALGIESHITPEYVRQEVARGRAVIPANIHHPESEPMIIGRNFAVKINTNIGNSATTSSID
EEVDKAVWSCKWGGDTLMDLSTGNNIHETREWILRNCPVPVGTVPIYQALEKVDGKVEDL
SWEVYRDTLIEQCEQGVDYFTIHAGIRRHNVHLADSRLCGIVSRGGSIMSKWCLLHDKES
FLYEHFDDICDIVAKYDVALSLGDGLRPGCTADANDAAQFAELDTMGELVVRAWEKNVQA
FIEGPGHVPMHKIKENMERQLEKCHEAPFYTLGPIVTDIAPGYDHITSAIGGAQIAWLGT
AMLCYVTPKEHLALPNKDDVRAGIIAYKIAAHAADLAKGHPGATIRDNALSKARFEFRWR
DQFHLSLDPELALQYFTEAGHTDGEYCTMCGPNFCAAKLTHDLRKIKH
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgatcacaaggcctatgctcagagagagaaggcttatatgcaaggaaatttg
tatcctgatgtaaaggtgggtatgaccaaggtgaacctgacaccaacggtgacgaaggat
gccgatggcaaaacccacgtagagaagaacgaaccagtgtatatctacgataccagcggt
ccttataccgaccccaactatacggttgacctgaagaagggactgccacccatgcgccag
cagtggattgccgatcgtgctcagaaggggcagggcatcacccagatggcgtgtgccaag
gcaggcatcatcactcccgagatggagtatgtggccattcgcgaaaacatgaactgccag
gcactgggtatcgagagtcatatcactcccgaatacgtacgccaggaggtggcacgcgga
cgtgccgttatccccgctaacatccatcaccccgagagcgagccgatgattatcggacgc
aactttgcggtgaaaatcaataccaatatcggtaattcggccacgacatcgagcatcgat
gaagaggtggataaggccgtttggtcgtgtaagtggggtggcgacacgctgatggacctc
tcaacgggtaacaacattcacgaaacccgcgagtggattctgcgtaactgtcctgtaccc
gtaggcaccgtgcccatctatcaggctttggaaaaggtggatggcaaggtggaagacctc
tcgtgggaggtgtatcgcgacacactcatcgaacagtgcgagcagggtgtggattacttt
accatccatgccggcatccgtcgccacaacgtgcacctggccgatagcagattgtgcggt
atcgtgagtcgtggcggtagcattatgagcaagtggtgcctgctgcacgataaggagagc
ttcctgtatgagcactttgatgatatctgcgatattgtggccaaatatgatgtggccctg
tcgctgggcgatggtttgcgccctggctgtacagccgatgccaacgatgccgcccagttt
gccgaactcgacaccatgggcgagctggtggtacgtgcctgggagaagaatgtgcaggcc
tttatcgagggtcccggtcatgtgcccatgcataaaatcaaggagaacatggagcgccag
ttggagaagtgccacgaggcaccattctacaccctcggacctattgttaccgatatcgct
cctggctacgatcatattaccagtgccatcggtggtgcgcagatagcctggctgggaact
gccatgctctgctacgtaacccccaaggagcatctggccctgcctaataaggatgatgtg
cgcgcaggtatcattgcctataagatagctgcccatgcagccgacctggcaaagggacac
cccggtgccaccatccgcgataacgccctgtcgaaagcccgtttcgagttccgttggcgc
gaccagttccacctgtcgttggatcccgaactggcgctgcagtatttcaccgaggcagga
cataccgatggcgagtactgcaccatgtgcggccctaacttctgcgctgccaagctcacg
cacgatttgaggaagattaaacattaa
DBGET
integrated database retrieval system
