Xylanibacter ruminicola: PRU_0445
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Entry
PRU_0445 CDS
T01212
Symbol
kdsA_1
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru00541
Biosynthesis of various nucleotide sugars
pru01100
Metabolic pathways
pru01250
Biosynthesis of nucleotide sugars
Module
pru_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PRU_0445 (kdsA_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pru01005
]
PRU_0445 (kdsA_1)
Enzymes [BR:
pru01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PRU_0445 (kdsA_1)
Lipopolysaccharide biosynthesis proteins [BR:
pru01005
]
Lipid A
PRU_0445 (kdsA_1)
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADE82949
UniProt:
D5EXI8
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Position
537868..538623
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AA seq
251 aa
AA seq
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MEPIIIAGPCVIESSDCLDEVAKEIVRINRKYGINIIFKSSFDKANRTSISSYRGPGMEK
GLIMLNDIREKYGLKLLTDIHESYQAAPAGEVVDVLQIPAFLCRQTDLLVAAANTGKVVN
IKKAQFLSGMDMEYPVQKVRESGNDRVWLTERGNMYGYNNLAVDFRNIADMKKFTDTVIM
DCTHSVQRPGAAGGKTGGNREFVPAMALAAKAFGATGFFFEIHPDPDNALSDGPNMVALK
DFESIVKSLID
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaattattattgcaggaccttgtgttatagaatccagtgattgtcttgacgag
gtcgcaaaggaaatagtccgtatcaacagaaagtacggtataaacataattttcaagtct
tcttttgataaggcaaatagaactagtattagttcttatcgtgggcctggtatggaaaaa
ggtcttattatgttgaatgatattcgcgagaagtatggcctgaagctcctcacagatatt
catgagtcatatcaagctgctccagctggagaagttgtagatgtgttgcagataccagcc
ttcttatgtcgacaaacagatttgctagttgctgcagccaacacaggaaaagtggtaaat
attaagaaagcccagttcttgagtggtatggatatggaatatcccgtacagaaagtacgc
gagagtggtaacgatagagtttggctcactgagcgtggtaatatgtatggatacaataac
ctcgcggtggatttccgtaatattgccgatatgaagaagtttactgatactgttatcatg
gattgcactcactctgtgcaacgaccaggtgctgctggcggaaaaactggaggcaataga
gagtttgtgccagctatggctctggcagcaaaagcttttggtgctacaggtttctttttc
gaaattcatcctgacccagataacgcattgagcgatggtcccaacatggtggcattaaag
gattttgaatctattgtaaaatcgttgatagattaa
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