Xylanibacter ruminicola: PRU_0479
Help
Entry
PRU_0479 CDS
T01212
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru00300
Lysine biosynthesis
pru00470
D-Amino acid metabolism
pru01100
Metabolic pathways
pru01110
Biosynthesis of secondary metabolites
pru01120
Microbial metabolism in diverse environments
pru01230
Biosynthesis of amino acids
Module
pru_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pru_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PRU_0479 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PRU_0479 (lysA)
Enzymes [BR:
pru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PRU_0479 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
AbrB-like
Motif
Other DBs
NCBI-ProteinID:
ADE81642
UniProt:
D5EXM0
LinkDB
All DBs
Position
complement(576206..577366)
Genome browser
AA seq
386 aa
AA seq
DB search
MAKGIFPVERFNEIETPFYYYDTVLLRQTLQTINSEASKHEGFVVHYAVKANANPRILRI
IREAGLGADCVSGGEVEASIKAGFPKEKIVYAGVGKSDWEIKLGLDNDIFCFNVESIPEL
EVINELAAQKGKVARVAFRLNPNVGAHTHANITTGLAENKFGIAMGDMVKVIREAEKMEN
VKFVGLHFHIGSQILDMGDFEALCNRVNELQQELISHRIRVEHINVGGGLGIDYAHPNRV
PIPDFKAYFDTYAKKLKLQPGQTLHFELGRAVVAQCGSLITRTLYIKEGAVKKFAIVDAG
FTDLIRPALYQAYHKIENITSDEAPEAYDVVGPICESTDVFAKQIDLNKAKRGDLLAIRS
AGAYGEIMASQYNCRRLPKGYMSDEL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggaatattcccagtagagaggttcaacgagattgagacacctttctactac
tacgacacagttctgctgcgccagacattacaaacgattaacagcgaagccagcaagcac
gaaggctttgtggtgcactatgccgtgaaggcaaatgccaacccacgcattctgcgcatc
atacgcgaagccggactgggtgccgattgcgtaagcggcggcgaggttgaagcatcaatc
aaggcaggcttccccaaggagaaaatcgtttatgctggtgtaggtaagagcgattgggaa
atcaaacttggactggacaacgacatcttctgttttaacgtagagagcatccccgagctc
gaggttatcaacgagctggcagcccagaagggcaaggtggctcgcgtggctttccgtttg
aatcccaatgtgggtgcccacacccacgctaacatcaccaccggactggccgagaacaag
ttcggcatcgctatgggcgatatggtaaaggtgattcgcgaggccgagaagatggagaac
gtaaaatttgtaggcttgcacttccatattggttcgcagatattggatatgggcgatttc
gaggcactctgcaatcgcgtaaacgagctgcagcaggagcttatcagtcatcgcatccgt
gttgagcatatcaacgtgggtggtggactgggtatcgactatgcgcaccccaaccgtgtg
cccattcccgatttcaaggcttacttcgacacctatgccaagaagctgaaactgcaaccc
ggacaaaccctgcactttgagctgggacgtgccgttgtggctcagtgcggtagccttatc
acacgtaccttatatattaaggaaggtgcagttaaaaagtttgccattgtcgatgcaggc
ttcaccgatctcatccgcccggcactctaccaggcttaccataagattgagaatatcacc
agcgacgaagcacccgaggcttatgatgtggtaggtcctatctgcgagagcaccgacgtg
tttgctaagcagatcgacctgaacaaggctaagcgtggcgatttgctggccatccgatcg
gctggtgcctatggcgagattatggcgtcgcagtacaactgtcgccgcctgccaaagggc
tacatgagcgatgagctgtaa
DBGET
integrated database retrieval system