Xylanibacter ruminicola: PRU_0600
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Entry
PRU_0600 CDS
T01212
Name
(GenBank) S1 RNA binding domain protein
KO
K06959
protein Tex
Organism
pru
Xylanibacter ruminicola
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PRU_0600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
Spt6_S1
RuvC
Motif
Other DBs
NCBI-ProteinID:
ADE83687
UniProt:
D5EYC0
LinkDB
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Position
complement(701688..703883)
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AA seq
731 aa
AA seq
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MQKNVFSCQIATQLGISQKFVEATLALLDEGCTIPFIARYRKERTGGLDEVQIAAISDRY
EKLLDIQKRKETVIKTITDLDKMTPELQERINQCWDATEIEDIYLPYKPKRRTRAQVARE
QGLEPLALLLMKQRERDPEAAAAKFAKGDVDSVESAIKGAQDIIAEVVSENEKSRQQLRN
AFTRQAVITSKVVKAKANSDEAAKYSDYFDWSEPLKRCSSHRLLAMRRGESEGILRISIS
PNDDEALERLKHHYVYGNTPCGRLVAEAIDDGYKRLLKPAIETEFAAQSKEKADEEAIHV
FAENLRQLLLGAPLGQKRVLGIDPGFRTGCKVVCLDAQGNLLHHDVIMPHPPVNKRTEAA
ITLQRLIQKFQIEAISIGNGTASRETDSFVKDVLAGKYNVAADSKSSKAKADDKNAPTPQ
VFVVSEAGASVYSASKVARDEFPNEDVTVRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQ
HDVDQTKLKHSLDQTVESCVNLVGVDLNTASQHLLMYVSGLGATLAKNIIDYRREHGAFT
SRAQLLKVPRLGPSAYQQCAGFLRIHNAKNPLDGTAVHPESYPIVQQMAKDQGCTVADLI
HNKEKREALELHRYVTADVGMPTLTDIMAELEKPGRDPRQQLEAFEFDKNVSTIDDLVEG
MVLPGIVTNITNFGAFVDIGVHHDGLVHISQMANRRIAHPLDVVKLHQHVQVRVTEVDHR
RQRISLSMKGL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaacgttttttcctgtcaaattgccacacaattaggcatcagtcagaagttc
gttgaagccacgttagccttgctcgacgagggctgcaccataccctttattgcccgatac
cgcaaagagcgtacaggcggactggatgaggtacagatagctgctatcagcgaccgttac
gagaagctgctcgatatacagaaacgcaaggaaacagttatcaaaaccatcaccgacctt
gataagatgacacccgaactccaagagcgcattaatcagtgctgggatgccaccgaaatc
gaggatatctacctaccctacaagcctaaacgtcgcacccgcgcacaagtggcccgtgaa
caagggctggagccactggctctgctgctgatgaaacaacgcgagcgtgatccagaagca
gctgcagccaagtttgcaaagggcgatgtggacagcgtagaaagcgccatcaaaggggct
caggacattattgccgaggtggtaagcgaaaacgagaaatcacgccaacagctacgtaat
gcctttacccgccaagctgttatcacctctaaagtggtaaaagccaaggccaatagcgac
gaagcagccaaatatagcgactattttgactggagcgaaccactaaaacgttgttcgtcc
caccgtctgctggccatgcgccgaggcgaatcagagggtatcttacgcatcagtatttcg
cccaacgatgatgaagcccttgagcgcctgaagcaccactatgtttatggtaacacccca
tgcggccgcttggtagccgaggctatcgacgatggttacaaacgtttgttgaaaccagct
atcgaaaccgagtttgccgcacaaagtaaagaaaaggccgatgaagaagctatccacgta
tttgccgaaaatctacgccaactgttgttaggcgccccgttaggtcagaagcgcgtattg
ggtatcgacccaggttttcgtactggttgcaaagtagtatgcttagatgcccaaggcaac
ctgctgcaccacgatgtgattatgccccacccacctgtaaacaaacgtactgaggccgct
atcaccctgcagcgcctgattcagaaatttcagatagaagccatctctattggtaatggt
accgccagtcgcgaaacagatagttttgtaaaagatgtactcgctggtaaatacaatgtt
gcagcagattcaaaatcttccaaagcgaaagctgatgacaaaaatgctcccaccccacag
gtctttgttgtttccgaagctggtgcctcagtttattctgcctcgaaagtggctcgcgat
gaattccccaatgaggatgtaaccgttcgtggtgccgtttctattggtcgacgactgatg
gatccactggccgaactggtaaaaatcgatcctaagagcattggtgtaggacagtatcag
cacgacgtggaccaaaccaaactcaagcactctctcgaccaaacagtagagagttgtgta
aacctggtaggagtagatttgaacaccgcctcgcagcacctgttgatgtacgtgagtggc
cttggtgccacactggccaaaaacattattgactatcgccgcgaacatggtgcttttacc
tcgcgtgcccagcttcttaaagttccccgattgggtccctcagcttatcagcagtgtgct
ggattcctgcgtatccacaacgccaagaacccgcttgacggcaccgctgtacaccctgag
agttatcctattgtgcagcaaatggccaaagatcagggctgcaccgtagccgaccttatt
cataacaaggaaaagcgcgaagctctggagttgcaccgctacgtaacagccgatgtgggt
atgcctacacttaccgatattatggccgaactagaaaagcctgggcgcgacccacgccag
cagcttgaggctttcgaatttgacaagaacgttagtaccatcgacgatttggttgagggc
atggtgctacccggtattgttaccaacatcaccaactttggagcctttgtagatattggt
gtgcatcacgacggtttggtacacatctcgcaaatggccaaccgccgtattgctcaccca
ctcgacgtggttaagcttcaccagcacgtacaagtacgcgtaaccgaggttgatcaccgt
cgtcagcgcatctctctgtccatgaaaggcctatag
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