Xylanibacter ruminicola: PRU_0752
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Entry
PRU_0752 CDS
T01212
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pru
Xylanibacter ruminicola
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pru03009
]
PRU_0752 (rimO)
Enzymes [BR:
pru01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PRU_0752 (rimO)
Ribosome biogenesis [BR:
pru03009
]
Prokaryotic type
ribosomal protein modification factors
PRU_0752 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
ADE83132
UniProt:
D5EZ20
LinkDB
All DBs
Position
883877..885190
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AA seq
437 aa
AA seq
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MSKTIDIISLGCSKNLVDSETLMGLMEANGYQCTHDSDDPQGEIVVVNTCGFINDAKEES
INTILEFAQAKTEGRIEKLFVMGCLSERYLADLEKEIPEVDGWYGKFNYKKLLKDLNGEE
YNACEGKRHITTPRHYAYIKISEGCDRHCAYCAIPLITGKHQSRPMQEILDEVRYLVSQG
TKEFNVIAQELTYYGVDLDGKQHIAELIEQMADIPGVEWIRLHYAYPTHFPWDLLRVIRE
KQNVCKYLDIALQHVSDNMLSRMRRHVTKDETYELVRRMREEVPGIHIRTTLMVGFPGET
DEDFEELKAFVKWARFERMGAFSYSEEEGTYSADNFEDDVPEDVKQSRLDKIMRIQQNIS
AELEAEKVGKVFKVIIDRREGDYYIGRTEFCSPEVDPEVLIPAAEAKLTIGNFYDVLITD
SEEFDLYGTTIIKTYEQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagacgatagatatcatttcactgggctgctcaaagaatctggttgatagcgag
actctgatgggcttgatggaggccaatggctatcagtgtacacacgatagcgacgaccct
cagggtgaaatcgtagtggtaaacacttgcggctttatcaacgatgccaaggaagagagt
atcaacaccatcctggagtttgctcaggccaagaccgaaggtcgtatcgagaagctcttt
gtgatgggctgtctctctgagcgctatctggccgacttggaaaaagagattcccgaggtt
gacggctggtacggcaaatttaattataagaagcttttgaaagacctgaatggcgaggag
tataacgcttgcgaaggtaagcgccatatcactacgccacgtcattatgcatatatcaag
attagcgagggttgcgatcgccattgtgcttattgcgccattccgctgattacaggtaag
catcagagtcgccccatgcaggaaatcctggatgaggtgcgttatctggttagtcagggc
accaaggagtttaatgtcattgcccaggagctgacctattacggtgtggatctggatggc
aagcagcatatcgctgagctcatcgagcagatggctgatatccctggtgtagaatggatt
cgcttgcattatgcttatcccacacactttccttgggatctgctgcgcgtgattcgcgaa
aagcagaacgtatgtaagtatctcgatatcgcactccagcatgtatcagataacatgctg
agccgtatgcgtcgccatgtgactaaggatgagacttatgagctggttcgtcgtatgcgc
gaagaggtgcccggcattcatatccgtaccaccctgatggttggtttcccaggcgagacc
gacgaggatttcgaggaactcaaggcctttgtaaagtgggctcgtttcgagcgtatgggt
gctttctcatattcagaagaagaaggaacctattcggctgacaacttcgaggacgatgtg
cctgaggatgtaaagcagagccgattggataagattatgcgtatccagcagaatatcagc
gccgaactcgaggctgagaaagttggaaaggtattcaaggtgattatcgaccgacgtgag
ggtgattattatatcggtcgtaccgagttctgttcgccagaagttgaccctgaggtgctg
ataccagcagctgaggcaaaacttaccatcggcaacttctatgatgtattgattacagat
tcggaagaatttgatttatatggaaccacaatcattaaaacatatgaacaataa
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