KEGG   Xylanibacter ruminicola: PRU_0813
Entry
PRU_0813          CDS       T01212                                 
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
pru  Xylanibacter ruminicola
Brite
KEGG Orthology (KO) [BR:pru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pru03032]
    PRU_0813 (gyrA)
   03400 DNA repair and recombination proteins [BR:pru03400]
    PRU_0813 (gyrA)
Enzymes [BR:pru01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PRU_0813 (gyrA)
DNA replication proteins [BR:pru03032]
 Prokaryotic type
  DNA Topoisomerases
   PRU_0813 (gyrA)
DNA repair and recombination proteins [BR:pru03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PRU_0813 (gyrA)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C Fe-S_assembly Retrotran_gag_2
Other DBs
NCBI-ProteinID: ADE82645
UniProt: D5EZ76
LinkDB
Position
948652..951183
AA seq 843 aa
MDQTFDNDRIIKINIEEEMKSSYIDYSMSVIVARALPDVRDGFKPVHRRILYGMMNINNV
STQPYKKCARVVGEVLGKYHPHGDSSVYGALVRMAQDWNMRYTLVDGQGNFGSVDGDSPA
AMRYTECRLSKMGEHIMDDLDKETVDMAPNFDDSLEEPTVMPTKIPNLLVNGGNGIAVGM
ATNMPTHNLGEVIDGCCAYIDNPDIDTEGLMQYIPGPDFPTGAYIYGLQGVKDAYETGRG
RIVMRAKAEIESGDTHDKIVVTEIPYGVNKADLVAYIADLANQHKIEGVANVNDESGRQG
MRIVVDCKRDANANVLLNKLFKMTALQSSFSVNNIALVKGRPRLLSLKECVKYFVEHRHD
VTIRRTKYDLRKAQERAHILEGLIIAVNNIDEVVHIIRNSKTPTDAQRNLEARFELDELQ
SKAIVDMRLAQLTGLRVDQLHQEFDDLQKLIAELQEILDNPERCKEVMKADLQEVKEKYG
DERRTEIIPFDHEFNAEDFYPDDPVVITISHMGYIKRTPLSEFHEQGRGGMGSKAARHRD
NDFTEYIYPATMHNTLLFFTQKGRCYWQKCYEIPEGDKNSKGRAIQNMLNIEPDDAINAV
LRIKNFNDTEFLNSHYVVFATKQGIIKKTCLEAYSRPRANGVIAININEGDQVVGVRLTN
GHNELLLANRNGRAVRFDENDVRVMGRVSTGVIGMRLDGGDDEVVGMVCVNDPNTETIMV
VSENGYGKRSEVEDYRKTSRGAKGVKTLSITEKTGRLVAIKVVTDENDLMIINKSGVLIR
LKVADVRVMGRATQGVRLINLTKKNDSIASVCKVMHSQAEDEDIEEAEIDAEAAQAPEAE
NKD
NT seq 2532 nt   +upstreamnt  +downstreamnt
atggatcaaacattcgacaacgacagaattattaagatcaacatcgaagaagagatgaaa
tcgagctatatcgattactctatgtcagtaatcgtggcccgtgcccttcccgatgttcgt
gatggcttcaagcctgttcatcgtcgtatcctttacggtatgatgaacattaataacgtt
tctacccagccttataagaagtgtgcccgcgtagtaggtgaggtgcttggtaagtaccac
ccacacggcgactcttcagtatatggtgccctggtacgtatggcccaggattggaacatg
cgttacaccttggttgatggtcagggtaacttcggttcggtggatggcgactcacctgct
gccatgcgttacaccgagtgccgcctctcaaagatgggtgagcacattatggacgacctg
gataaggaaaccgtagatatggcgcctaacttcgacgactcgctcgaggagccaaccgtt
atgcctaccaagattcctaatctgctggttaacggtggtaacggtattgccgtaggtatg
gctaccaatatgcctacccacaacctgggcgaggtaatcgatggttgctgcgcttatatc
gacaatcctgatatcgataccgaaggcctgatgcagtatatcccaggtcccgacttccca
acaggtgcttatatctatggcctgcagggcgtgaaggatgcctacgaaacaggtcgcgga
cgtatcgtaatgcgtgccaaggccgagattgagagcggcgacactcacgataagattgtg
gtaaccgagattccttacggtgtaaacaaggccgacctggtagcttatatcgccgatctg
gctaaccagcacaagatcgagggtgtagctaatgttaacgatgagtcgggccgtcagggt
atgcgtatcgttgtggattgcaagcgcgatgccaacgccaatgtgctgctcaacaagctg
tttaagatgacagcccttcagagctcattctcagttaataacatcgctctggtaaagggt
cgcccacgcctgctttcgctcaaggagtgtgtgaagtatttcgttgagcatcgtcacgac
gtaaccatccgtcgtaccaagtacgatctgcgcaaggcacaggagcgtgcccacatcttg
gagggcttgattattgccgttaacaatatcgacgaggttgtacatattatccgtaacagt
aagactcctaccgatgctcagcgtaacttggaggcccgtttcgaactcgacgagctgcag
agtaaggctatcgtcgacatgcgtctggctcagctcactggtctgcgtgttgatcagctc
caccaggagttcgacgacttgcagaagcttattgccgagttgcaggagattctggataac
cccgagcgttgtaaggaggtgatgaaggccgacctgcaggaggtgaaggagaagtatggc
gacgagcgtcgtaccgagattattcctttcgaccacgagttcaatgccgaggacttctat
cccgacgatccagtggttatcactatctcgcacatgggttacatcaagcgcaccccactg
tcagagttccacgagcagggtcgtggcggtatgggatcaaaggctgcccgtcatcgcgac
aacgactttaccgagtatatctatcctgccaccatgcacaacacgctgctgttcttcaca
cagaagggtcgttgctactggcagaagtgttacgagattcctgagggcgataagaactca
aagggtcgcgctatccagaatatgctgaatatcgagcccgatgatgccatcaacgccgtt
ctgcgtatcaagaacttcaacgataccgagttcctcaactcacactacgtggtattcgct
accaagcagggtatcatcaagaagacctgtctcgaggcttactcacgtccacgtgccaac
ggtgtgattgctatcaacatcaacgagggcgaccaggtagtaggcgttcgcctcaccaac
ggtcacaacgagctgttgctggctaaccgtaacggtcgtgccgtacgtttcgacgagaac
gatgtacgcgtcatgggtcgtgtatctaccggtgtaatcggtatgcgtctcgacggtggc
gacgacgaggttgtaggtatggtttgcgtcaacgatcctaacaccgagactatcatggta
gtttctgagaacggttatggtaagcgttctgaggttgaggattaccgtaagacctcacgt
ggtgccaagggtgttaagaccctctcaatcaccgagaagaccggtcgcctggtagccatc
aaggtggtaaccgacgagaacgacctgatgattattaataagagtggtgtactgattcgc
ctgaaggtggccgatgttcgtgtcatgggccgtgccacacagggtgttcgtctcatcaac
ctcaccaagaagaacgatagcatcgcttcggtatgtaaggtaatgcactcgcaggccgag
gacgaggatatcgaggaggcagagatcgacgctgaggcagctcaggctcctgaagctgag
aataaggattaa

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