Xylanibacter ruminicola: PRU_0813
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Entry
PRU_0813 CDS
T01212
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pru
Xylanibacter ruminicola
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pru03032
]
PRU_0813 (gyrA)
03400 DNA repair and recombination proteins [BR:
pru03400
]
PRU_0813 (gyrA)
Enzymes [BR:
pru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PRU_0813 (gyrA)
DNA replication proteins [BR:
pru03032
]
Prokaryotic type
DNA Topoisomerases
PRU_0813 (gyrA)
DNA repair and recombination proteins [BR:
pru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PRU_0813 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Fe-S_assembly
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
ADE82645
UniProt:
D5EZ76
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Position
948652..951183
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AA seq
843 aa
AA seq
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MDQTFDNDRIIKINIEEEMKSSYIDYSMSVIVARALPDVRDGFKPVHRRILYGMMNINNV
STQPYKKCARVVGEVLGKYHPHGDSSVYGALVRMAQDWNMRYTLVDGQGNFGSVDGDSPA
AMRYTECRLSKMGEHIMDDLDKETVDMAPNFDDSLEEPTVMPTKIPNLLVNGGNGIAVGM
ATNMPTHNLGEVIDGCCAYIDNPDIDTEGLMQYIPGPDFPTGAYIYGLQGVKDAYETGRG
RIVMRAKAEIESGDTHDKIVVTEIPYGVNKADLVAYIADLANQHKIEGVANVNDESGRQG
MRIVVDCKRDANANVLLNKLFKMTALQSSFSVNNIALVKGRPRLLSLKECVKYFVEHRHD
VTIRRTKYDLRKAQERAHILEGLIIAVNNIDEVVHIIRNSKTPTDAQRNLEARFELDELQ
SKAIVDMRLAQLTGLRVDQLHQEFDDLQKLIAELQEILDNPERCKEVMKADLQEVKEKYG
DERRTEIIPFDHEFNAEDFYPDDPVVITISHMGYIKRTPLSEFHEQGRGGMGSKAARHRD
NDFTEYIYPATMHNTLLFFTQKGRCYWQKCYEIPEGDKNSKGRAIQNMLNIEPDDAINAV
LRIKNFNDTEFLNSHYVVFATKQGIIKKTCLEAYSRPRANGVIAININEGDQVVGVRLTN
GHNELLLANRNGRAVRFDENDVRVMGRVSTGVIGMRLDGGDDEVVGMVCVNDPNTETIMV
VSENGYGKRSEVEDYRKTSRGAKGVKTLSITEKTGRLVAIKVVTDENDLMIINKSGVLIR
LKVADVRVMGRATQGVRLINLTKKNDSIASVCKVMHSQAEDEDIEEAEIDAEAAQAPEAE
NKD
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacattcgacaacgacagaattattaagatcaacatcgaagaagagatgaaa
tcgagctatatcgattactctatgtcagtaatcgtggcccgtgcccttcccgatgttcgt
gatggcttcaagcctgttcatcgtcgtatcctttacggtatgatgaacattaataacgtt
tctacccagccttataagaagtgtgcccgcgtagtaggtgaggtgcttggtaagtaccac
ccacacggcgactcttcagtatatggtgccctggtacgtatggcccaggattggaacatg
cgttacaccttggttgatggtcagggtaacttcggttcggtggatggcgactcacctgct
gccatgcgttacaccgagtgccgcctctcaaagatgggtgagcacattatggacgacctg
gataaggaaaccgtagatatggcgcctaacttcgacgactcgctcgaggagccaaccgtt
atgcctaccaagattcctaatctgctggttaacggtggtaacggtattgccgtaggtatg
gctaccaatatgcctacccacaacctgggcgaggtaatcgatggttgctgcgcttatatc
gacaatcctgatatcgataccgaaggcctgatgcagtatatcccaggtcccgacttccca
acaggtgcttatatctatggcctgcagggcgtgaaggatgcctacgaaacaggtcgcgga
cgtatcgtaatgcgtgccaaggccgagattgagagcggcgacactcacgataagattgtg
gtaaccgagattccttacggtgtaaacaaggccgacctggtagcttatatcgccgatctg
gctaaccagcacaagatcgagggtgtagctaatgttaacgatgagtcgggccgtcagggt
atgcgtatcgttgtggattgcaagcgcgatgccaacgccaatgtgctgctcaacaagctg
tttaagatgacagcccttcagagctcattctcagttaataacatcgctctggtaaagggt
cgcccacgcctgctttcgctcaaggagtgtgtgaagtatttcgttgagcatcgtcacgac
gtaaccatccgtcgtaccaagtacgatctgcgcaaggcacaggagcgtgcccacatcttg
gagggcttgattattgccgttaacaatatcgacgaggttgtacatattatccgtaacagt
aagactcctaccgatgctcagcgtaacttggaggcccgtttcgaactcgacgagctgcag
agtaaggctatcgtcgacatgcgtctggctcagctcactggtctgcgtgttgatcagctc
caccaggagttcgacgacttgcagaagcttattgccgagttgcaggagattctggataac
cccgagcgttgtaaggaggtgatgaaggccgacctgcaggaggtgaaggagaagtatggc
gacgagcgtcgtaccgagattattcctttcgaccacgagttcaatgccgaggacttctat
cccgacgatccagtggttatcactatctcgcacatgggttacatcaagcgcaccccactg
tcagagttccacgagcagggtcgtggcggtatgggatcaaaggctgcccgtcatcgcgac
aacgactttaccgagtatatctatcctgccaccatgcacaacacgctgctgttcttcaca
cagaagggtcgttgctactggcagaagtgttacgagattcctgagggcgataagaactca
aagggtcgcgctatccagaatatgctgaatatcgagcccgatgatgccatcaacgccgtt
ctgcgtatcaagaacttcaacgataccgagttcctcaactcacactacgtggtattcgct
accaagcagggtatcatcaagaagacctgtctcgaggcttactcacgtccacgtgccaac
ggtgtgattgctatcaacatcaacgagggcgaccaggtagtaggcgttcgcctcaccaac
ggtcacaacgagctgttgctggctaaccgtaacggtcgtgccgtacgtttcgacgagaac
gatgtacgcgtcatgggtcgtgtatctaccggtgtaatcggtatgcgtctcgacggtggc
gacgacgaggttgtaggtatggtttgcgtcaacgatcctaacaccgagactatcatggta
gtttctgagaacggttatggtaagcgttctgaggttgaggattaccgtaagacctcacgt
ggtgccaagggtgttaagaccctctcaatcaccgagaagaccggtcgcctggtagccatc
aaggtggtaaccgacgagaacgacctgatgattattaataagagtggtgtactgattcgc
ctgaaggtggccgatgttcgtgtcatgggccgtgccacacagggtgttcgtctcatcaac
ctcaccaagaagaacgatagcatcgcttcggtatgtaaggtaatgcactcgcaggccgag
gacgaggatatcgaggaggcagagatcgacgctgaggcagctcaggctcctgaagctgag
aataaggattaa
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