Xylanibacter ruminicola: PRU_0838
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Entry
PRU_0838 CDS
T01212
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru03030
DNA replication
pru03430
Mismatch repair
pru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PRU_0838
03430 Mismatch repair
PRU_0838
03440 Homologous recombination
PRU_0838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pru03032
]
PRU_0838
03400 DNA repair and recombination proteins [BR:
pru03400
]
PRU_0838
Enzymes [BR:
pru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PRU_0838
DNA replication proteins [BR:
pru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PRU_0838
DNA repair and recombination proteins [BR:
pru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PRU_0838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADE81898
UniProt:
D5EZA0
LinkDB
All DBs
Position
complement(980268..981125)
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AA seq
285 aa
AA seq
DB search
MKLNLTKPLVIFDLETTGLDLVKDRIIQISYIKVYPDGHEERGNELVNPEKPIEPMITQL
TGISNDDVKDKPTFKQLGAVLAEKFTGCDFAGFNSNHFDIPLLAEEFLRAGVDFDFSKCK
MIDAQTIFHKMERRNLAAAYKFYCGRKMEEDFEAHRADQDTEATYRVLMGELDKYAPGAN
EDPEKVLENDMNKLAEFSRVNNNVDFAGRIVWGEMKDRNGNTLLDEQGNPRLTEVFNFGK
HKGIPVADVLHIDPGYYSWILSGDFTYNTKQILTRIRLRESKLNG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgaatttaactaaacctctggtaatatttgatctggaaactacgggccttgac
ttggttaaggaccgtattatccagatctcgtatataaaagtatatcccgacggacacgaa
gagcgtggcaacgagttggtaaaccccgaaaagcccatcgagccgatgattacccagctt
acgggtatctcgaacgacgatgtaaaggataagcccacattcaagcagttgggcgccgtg
ctggccgagaagtttactggctgcgactttgcgggctttaactcaaaccactttgatatt
cccctactcgctgaggaattcctgcgtgctggcgtagattttgatttcagcaagtgcaag
atgatcgacgcacagaccatcttccataagatggagcgccgtaatctggctgctgcctac
aagttctactgcggacgcaagatggaggaagacttcgaagcacaccgtgccgaccaggat
accgaagccacctaccgtgtgctgatgggcgagctggacaagtatgcaccaggtgctaac
gaggatcccgagaaggtgcttgagaacgatatgaacaagttggccgaattctcacgtgta
aacaacaacgtggattttgccggtcgtatcgtttggggcgagatgaaggaccgcaacggt
aacaccctactcgacgaacagggcaacccacgcctcaccgaggtgttcaacttcggtaag
cacaagggcattcctgtagccgacgtgctgcatatcgacccaggctactacagctggatt
ctgtcgggcgacttcacgtataacaccaagcaaatacttacaagaattcgtcttcgcgag
tcaaaacttaacggatga
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