Xylanibacter ruminicola: PRU_1188
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Entry
PRU_1188 CDS
T01212
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru03030
DNA replication
pru03430
Mismatch repair
pru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PRU_1188
03430 Mismatch repair
PRU_1188
03440 Homologous recombination
PRU_1188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pru03032
]
PRU_1188
03400 DNA repair and recombination proteins [BR:
pru03400
]
PRU_1188
Enzymes [BR:
pru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PRU_1188
DNA replication proteins [BR:
pru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PRU_1188
DNA repair and recombination proteins [BR:
pru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PRU_1188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ADE83150
UniProt:
D5ESA2
LinkDB
All DBs
Position
1409945..1410436
Genome browser
AA seq
163 aa
AA seq
DB search
MKDFAAIDFETANNERTSVCSVGVVIVRDGEIVDSFYSLIQPEPNYYNYWCSQVHGLTRQ
DTEEAPIFPEVWKQIEPMIEGLPLVAHNKAFDESCLKAVFRCYQMDYPDYQFYCTCVASR
KAFPNAANHQLHTISKLCGYELENHHHALADAEACAWIAREIL
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattttgctgcaatagattttgagactgctaacaacgagcgaaccagtgtttgc
tcagtaggagttgtgattgtgagagatggcgagattgtggattccttctattcgctgata
cagccagagcccaattactataattattggtgtagtcaggtgcatggactaacacgtcag
gatacagaggaggccccaatatttccagaagtatggaagcagattgagccaatgattgaa
ggtttgcccttggtggcacataacaaagctttcgatgagagttgcttaaaggccgtgttt
cgttgttatcagatggactatccagattatcagttctattgtacttgtgtggcttctcgc
aaagcattcccaaatgccgcgaatcaccagctacatacgatttctaagctatgtggttat
gagctagagaaccaccatcatgccctcgccgatgccgaagcatgtgcctggatagccaga
gaaatcctataa
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