Xylanibacter ruminicola: PRU_1356
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Entry
PRU_1356 CDS
T01212
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
pru
Xylanibacter ruminicola
Pathway
pru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PRU_1356 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pru03400
]
PRU_1356 (uvrB)
DNA repair and recombination proteins [BR:
pru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PRU_1356 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PRU_1356 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
AAA_30
DEAD
AAA_22
SLFN-g3_helicase
Kinesin
Microtub_bd
AAA_16
AAA_14
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
ADE81451
UniProt:
D5ESR5
LinkDB
All DBs
Position
1606570..1608609
Genome browser
AA seq
679 aa
AA seq
DB search
MSKFILTSEYKPTGDQPEAIRQLTEGLDRGDRAQVLLGVTGSGKTFTMANVIAQHNRPTL
ILSHNKTLAAQLYEEMKGFFPQNAVEFYVSYYDYYQPEAYLPTTDTYIEKDLAINDEIDR
LRLSAVSNLLSGRNDVVVVSSVSCIYGMGSPVALQENVIELKKGQILDRNALLRKLVAAL
YVRNDLDLQRGNFRVKGDTVDIAMAYSEVVLRITFWDDEIDAIEEMDAVTFDRLASFDEY
RLYPANLFMTSQEQTNIAIHQIQDDLMKQVLYFEEIGDNIKAQRIKERVEYDMEMIKELG
HCSGIENYSRYFDGRQAGERPYCLLDFFPDDYLLIIDESHVSVPQISAMYGGDRSRKQNL
VEYGFRLPAAFDNRPLKFEEFQQEVNQVIYVSATPADYELNEAEGVVVEQVIRPTGLLDP
EIEVRPSENQIDDLMDEILTRSHRGERVLITTLTKRMAEELTEYLLNHSVKTAYIHSDVA
TLDRVKILSDLRQGVYDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGR
AARNVNGKVIMYADTITASMQLTIDETLRRRLKQMKYNEEHHITPKQIVKNLSFNALQKE
NRADTKELMRNFSMAAENGDAGVRVAADPIEERMTRPQMEKLIEETTRKMKEAAKQLDFL
QAAQYRDEIVRLQKELELK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatttatactaacatcggaatataaacccactggcgatcagcccgaggcgata
cgtcagttaactgagggattggatcgcggagaccgtgctcaggtactgcttggagtaacg
ggatcgggtaagacatttacgatggcaaacgtgattgcgcaacacaatcgccctaccctg
attctgagtcataacaagacattggcagcacagctttacgaagaaatgaaaggtttcttt
ccgcagaacgccgtagagttttatgtaagctattatgactactatcaaccagaagcatac
ctacccaccaccgatacttacatcgaaaaggatctggccatcaacgacgagatcgaccgc
ttgcgtctatccgccgtatccaacctactttcaggtcgtaacgatgtagttgtggtatca
tccgtatcatgcatttatggtatgggaagcccggtagcgcttcaggagaatgtaatcgag
ctgaagaaaggtcagattcttgaccgcaatgctttgttaagaaagttggtagccgcatta
tatgtacgaaacgacttggatttgcagcgaggtaactttcgcgtaaagggcgataccgta
gatattgcgatggcctatagcgaggtggtactccgtattacattctgggacgatgagatc
gacgccatcgaagagatggatgctgttacctttgaccgactggccagtttcgacgaatac
cgcctgtacccagccaaccttttcatgacctcgcaagagcaaaccaacatagccatccac
cagattcaggacgacctgatgaaacaggtgctctatttcgaggagattggcgataacatc
aaggctcaacgcattaaggaacgcgtagagtacgacatggaaatgatcaaggaactgggc
cattgctcgggtatcgagaactatagccgctattttgatggtcgccaagctggcgaacgt
ccttactgtctgctggatttcttccccgacgactatctgctcattatcgacgagagtcac
gtaagtgtaccgcaaatcagcgccatgtatggcggcgaccgcagccgcaagcagaacctg
gtagaatacggtttccgtttgcctgccgccttcgacaaccgaccgctgaagttcgaggaa
ttccagcaggaggtgaatcaggtgatctacgtgagcgctaccccagccgattacgaattg
aatgaggccgagggcgtagtggttgaacaggttatccgtcctacaggactgctcgaccca
gagattgaggtacgccccagcgagaatcagatagacgacttgatggacgagatcctgact
cgtagtcatcgtggtgagcgtgtactcatcaccacactgaccaagcgcatggccgaggaa
ctcacagaatatctgctgaaccacagcgtaaaaaccgcctacatccatagcgatgtagcc
acactggaccgtgtaaagattctgagcgatttgcgccaaggcgtttacgacgtactggta
ggtgtaaacctacttcgtgaaggtctcgacctgcccgaagtatcactggttgccatcctt
gatgccgataaggaaggctttttgcgcagtcatcgcagcttgacgcagacagccggtaga
gccgcccgtaacgtaaacggcaaggtgattatgtatgccgataccatcacggcatcgatg
cagctaaccatcgacgaaaccctgcgccgccgcctgaaacagatgaaatacaacgaggag
catcacatcactccaaagcagattgtgaagaacctgagtttcaacgctttacagaaggag
aaccgtgccgacacgaaggagctgatgcgtaacttctcgatggctgccgaaaacggcgat
gctggtgtgagagtggctgccgacccgatagaggaacgcatgacccgaccacagatggaa
aagctgatagaagagactacacgcaagatgaaagaagctgccaaacagctcgacttcctg
caagctgcacaatatcgcgatgagatagttagattgcagaaagagctggaattgaagtaa
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