Xylanibacter ruminicola: PRU_1410
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Entry
PRU_1410 CDS
T01212
Name
(GenBank) putative lipoprotein
KO
K21470
L,D-transpeptidase YcbB
Organism
pru
Xylanibacter ruminicola
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pru01002
]
PRU_1410
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pru01011
]
PRU_1410
Peptidases and inhibitors [BR:
pru01002
]
Cysteine peptidases
Family C82
PRU_1410
Peptidoglycan biosynthesis and degradation proteins [BR:
pru01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PRU_1410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
ADE82113
UniProt:
D5ESW6
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All DBs
Position
complement(1682674..1684164)
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AA seq
496 aa
AA seq
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MLHIKGRKSSSQGIHPISFGLLSICLVLVSCFGHGSQELSEAERSAFGEYVNQLDSAVTG
AWFDRMGVSADADSVLAYLRREVPRNGLDTTAFFVPEIAKDLEIVHQLLFDSVGMSINEV
LPRLNAHLSKAYIRYATGQRYGFMKPRVFNHMDPKVGNPGIFARVFDYDPALPDTSVAAK
KMTESDRLAFLVSSAPDTYIYKALLREMDKTTNADKRHQLAVNMERCRWQIEHPKDVKRQ
ILVNIPAQQLWAIDVDSVLDMRICCGAVPTKTPLLHSAISYMQVNPEWVIPQNIVKTEVV
HHAGDSAYFARNRYSVIDKESGDTLNVASVGANALLSGKLRISQKGGVGNSLGRIVFRSQ
NDFSIYLHDTNNRSAFQRDRRTLSHGCVRVQKPFELASFLLSDVDEWTLESLRISMDIPP
VTDRGREWLHKHADAPHPYRLISYHAVKPHVPLYILYYTTFPNPKTGAIDYWPDLYGFDK
VISKELKWISEGSSSR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgttacatattaaaggtcggaaaagtagttcgcaaggtatccatccgataagtttcggt
ttgttgagtatctgtttggtgctggtttcctgcttcggtcatggaagccaagaactatct
gaggctgaacgttctgcttttggtgaatatgttaatcagttagacagtgcggttaccggt
gcttggtttgatagaatgggggtatcggcagatgccgattccgttttggcctatctgcgc
cgtgaggtgccacgtaacggcttagatacaactgctttttttgtacctgagatagctaag
gatttagagattgttcatcagctattattcgattcggttgggatgagtatcaatgaggtg
ctacctcgtttgaatgcccatctgtccaaggcatatattcgctatgcaactggtcaacgg
tatggttttatgaaaccacgtgtgtttaatcatatggatcccaaggtgggtaatcctggc
attttcgctcgtgtgtttgattatgatccagctttgccagatacatctgtggctgccaaa
aagatgactgaaagcgatcgcttggctttccttgtttcttcagcgcctgatacttatatc
tataaggcgctgttgcgtgaaatggataagacaaccaatgctgataaacgccatcagttg
gcggtaaacatggagcgttgtcgctggcagatagagcatcctaaggatgtaaaacgccag
atattggtaaatatccctgctcagcagttgtgggcgatagatgttgatagtgtgcttgat
atgcgtatctgttgtggtgcggtgccaaccaaaacgcctttattgcatagtgccatcagc
tatatgcaggtaaaccctgagtgggtgattccacagaatatcgtaaagaccgaagtagtg
catcatgctggcgattcggcttactttgcccgtaaccgttattctgttatcgataaggaa
tcgggtgatactctgaatgttgccagtgttggtgctaatgcgttactttctggtaaattg
cgtattagtcagaagggtggagtaggcaactctttgggccgtatcgtattccgttcccag
aatgatttctcgatttatcttcacgataccaataaccgtagtgctttccagcgagatcgc
cgcaccctgtcgcatggttgtgtccgtgtgcagaaaccgtttgaactggccagttttctg
ttatctgatgtggatgaatggacactcgagagtcttcgcatctcgatggatattccgcct
gtaaccgatcgtggtcgtgagtggctgcacaaacatgctgatgccccgcatccgtatcga
ctgatatcctatcatgctgtaaagcctcacgtgcctctatacatattgtattatacaacc
ttccccaatcctaagacgggcgctattgattattggcccgatttgtatggattcgataag
gtgattagtaaagaattaaaatggataagcgaagggagttcgagtcgatag
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