Xylanibacter ruminicola: PRU_1794
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Entry
PRU_1794 CDS
T01212
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
pru
Xylanibacter ruminicola
Pathway
pru02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PRU_1794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pru03021
]
PRU_1794
Transcription machinery [BR:
pru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PRU_1794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ADE82433
UniProt:
D5ETX9
LinkDB
All DBs
Position
complement(2161712..2162584)
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AA seq
290 aa
AA seq
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MRQLKIQKSITNRSSEALDKYLVEIGRQPLVTIDEEIELAQAIRRGGPEGEKAKERLVTA
NLRFVVSVAKQYQHQGLTLTDLIDEGNIGLVKAAEKFDETRGFKFISYAVWWIRQSILQA
IAEQSRIVRLPLNQSGALSKINQEINKFEQQHQRRPSVTELAELTQIEESKIEQTAKADS
HHMSIDAPFGEDDDNSMADMLSSGEDTRTDKLVDYESLTSDLDNVLRNVLKDRELKIVKE
CFGIGCQERGLEEIGAEMGLTRERVRQIREKSITKLHDSGYARILMKYLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaattaaagattcaaaaaagtattaccaaccgatcaagtgaggcactcgacaag
tatcttgtagaaatcggtcgtcaaccccttgtcactattgatgaagagattgagctggct
caggccatccgtcgtggcggtcctgagggcgagaaggcgaaggaacgcctggtaacagcc
aatctgcgcttcgtggtgtctgtagcaaaacagtaccagcatcagggattgacactcacc
gacctgatcgacgagggaaatataggactggtaaaggcagccgagaagtttgatgagaca
cgcggatttaagtttatctcttatgccgtatggtggattcgtcagagcattctgcaggcc
attgccgagcagagtcgtattgtgcgcttgcccctgaaccagagtggcgctctgagcaag
attaatcaggaaatcaataagttcgagcagcagcaccagcgccgcccatctgttaccgag
ctggctgagctcacacagattgaggagtcgaagattgagcagactgccaaggccgatagt
caccacatgagtatcgacgcacctttcggtgaggacgacgacaactcaatggccgacatg
ctgagcagtggcgaggatacccgtaccgacaagctggtggattacgagtcgctcacatcc
gatctggacaatgtactgcgtaacgtactgaaggatcgtgaactcaagattgtcaaggag
tgcttcggtattggctgtcaggagcgtggtctcgaggagattggcgccgagatgggactc
acgcgtgagcgtgtacgtcagattcgcgaaaagagcatcaccaaactgcacgacagtggt
tatgcacgcatcttgatgaaataccttggctaa
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