Xylanibacter ruminicola: PRU_1832
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Entry
PRU_1832 CDS
T01212
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pru
Xylanibacter ruminicola
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pru03016
]
PRU_1832 (truB)
Enzymes [BR:
pru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PRU_1832 (truB)
Transfer RNA biogenesis [BR:
pru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PRU_1832 (truB)
Prokaryotic type
PRU_1832 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
TruD
Ig_TgrO1
Motif
Other DBs
NCBI-ProteinID:
ADE83242
UniProt:
D5EU15
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All DBs
Position
complement(2207728..2208432)
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AA seq
234 aa
AA seq
DB search
MNFQEGAYIYINKPYRMSSFGALAHIRYVLSKRLHVKRVKMGHAGTLDPLATGVLVLCTG
KATKQIEALQLHSKEYTATLQLGATTPSYDLEHEVDATYPTAHITRELIEQTLPRFVGDI
MQRPPLFSACKVGGDRAYELARKGSDHQLAEKPVHIDEIEIIDFDPEKMQLQIRVGCGKG
TYIRSLARDIGEALGSGAHLTALCRTRVGDVRLEDCLTFDEFPAWLEEKLNIND
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaactttcaggaaggcgcatatatctatatcaacaagccctatcgtatgagcagtttc
ggggcgctggcgcatatccgttatgtgctgagcaaacgactgcatgtgaaacgtgtgaaa
atggggcatgccggcaccttagaccccttggcaacaggtgtgctggtgctgtgcaccggt
aaggccaccaagcagattgaggctttgcagctgcactcaaaggagtatacggctaccctg
cagttgggtgccaccactcccagttacgacttggagcatgaggtggacgcaacttacccc
acagcgcatatcacccgtgagctgattgagcagacactgcccaggtttgtgggcgatatt
atgcagcgaccaccgctgttttcggcctgtaaggtaggtggcgaccgtgcctacgaactg
gcacgcaagggtagcgaccaccagttggccgagaagccagtgcatatcgatgagatagaa
atcattgatttcgatcccgaaaagatgcagctgcagatacgtgtgggatgcggtaagggt
acctacatccgctcgctggctcgcgacattggcgaggcccttggcagcggcgcacatctt
actgccctgtgccgcactcgcgtgggcgacgtcagactggaggattgtctcacattcgat
gagttcccagcctggcttgaagagaaattaaacattaatgattaa
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