Xylanibacter ruminicola: PRU_1950
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Entry
PRU_1950 CDS
T01212
Name
(GenBank) putative receptor antigen RagA
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pru
Xylanibacter ruminicola
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pru02000
]
PRU_1950
Transporters [BR:
pru02000
]
Other transporters
Pores ion channels [TC:
1
]
PRU_1950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
TTR_TEN1-4
CooC_C
Motif
Other DBs
NCBI-ProteinID:
ADE81757
UniProt:
D5EUC6
LinkDB
All DBs
Position
2342544..2345735
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AA seq
1063 aa
AA seq
DB search
MKKSRLVMMFLALMVTMTSWAQGIVGTVIDDQGETVIGASVVEKGNPQNGTITDFNGNFT
IKVNEGATIVVSYIGYVTQELKATRNMRVVLKEDAQTLQDVVVIGYGVQKKSVVTASIAK
VSSDDLEGKTRLRADDALKGLAAGVNVTSANGQPGSQSMIRVRGTGTINDTNPLYIIDGM
PTDQYGLESVNPYDIESIEVLKDAASGAIYGARAANGVILVTTKKGKVGKAQINYNFSYG
WQSAWKHRDVTSATDYAILQNEKYVNGGQAPLYADPYNLTDANGNKITGFGTDWQELLFN
DNAPVVQHDVSVSGATEKVNYYLSLGYYTQDGIVGGNYGRSNYDRLTINSNNQFNLFDDS
KERNFLNKLDISANLSYMRTHSTGIDTNSTWGSPLGSALYLAPTLPVTLTGAVAQDMIDR
YSAYDLYRDENGNPYTIPNYVGSYQEQNNPIAMMQGNPSRGWSHKFRPKFAIDLQIWDNL
KYHFTWSAEQSFWGSEGATVSKYYLSGNNNSDHTSASAEKADATQWQVENTLTYDKEFGK
HSIGVVLGQSALKYKGSYVGASHWNLINVNKPYVDYTTGGSIETTTDADGHITGVKSLVS
GWAGPNVEHHLASLFARLSYNYDEKYMFQGTIRRDGSSRFGSNNKYGVFPSFSIGWNIMN
EDFMKNTSDWLSNLKFRASWGKNGNENIGDFRYTVLTTTGGTSNYYFGRQGVMNYGSKAN
GLANENLKWEESEQTDLGIDLGLWNNKLTFTVDYYIKKTNGMLMTMPIPSYVGETKPIGN
VGDMENKGIEFELGYKFNIADAHFAIKANASHLKNTLKNLGNDTGFLNYGISQFSDGGTR
AENGQPFPYFYGYKTAGVLQNQAEADAYNAKNHASSVPGDLIFVDVNGDGYITSDDRTKI
GKPTPDWTYGLNLNADWKGFDFNIFFQGVYGADIFDATWRQDIASGNYPTWVLQRWTGEG
TSNKIPMLKLGDSKNWVVSDIYVQDGSYLRLKNISLGYTLPKQLTKRVNIERFRVYVRAE
NLFTWTKYWGFDPEIGSGSTSMGVDYGVYPQARIFTVGCNLSL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagcaggttagtaatgatgtttctggcacttatggtgaccatgacatcttgg
gcccagggaatcgtgggcactgtgattgacgaccagggcgagaccgttatcggtgcttcg
gtcgttgaaaaaggtaatcctcagaatggtactattaccgactttaatggaaacttcacc
attaaggttaacgagggcgctactatcgtagtaagttacattggttatgtaacccaagaa
ctaaaagcaacccgcaacatgcgtgtggtgctgaaagaagatgcacagactctgcaggac
gtagttgttatcggctacggtgtgcagaagaagagcgtggtaacagcctcaatcgccaag
gttagctcggatgacctggagggtaagacacgtctgcgtgccgatgatgccctgaaaggt
ctggctgctggtgtaaacgttacatctgccaacggacagcctggttcacagtcgatgatt
cgcgtgcgcggtacaggtactattaatgataccaacccgctgtacattatcgatggcatg
cctaccgaccagtacggtctggagagcgttaacccttacgatatcgagagtatcgaggta
ctgaaggatgcggcatcaggtgccatctatggtgctcgtgctgccaacggtgtcatcctc
gttactactaagaaaggtaaagtgggtaaggctcagatcaactataacttcagctacggt
tggcagagcgcctggaagcatcgcgacgtgaccagtgctaccgactatgccatcctgcag
aacgagaaatacgtgaacggcggacaggctcctttgtatgccgatccttataacctgacc
gatgccaacggtaacaagattaccggttttggtaccgattggcaggaactgctgtttaac
gataacgcccctgtagtacagcacgacgtatcggttagcggtgctaccgaaaaggtaaac
tactacctgtcgctgggttactacactcaggatggtatcgtgggtggtaactacggccgc
tctaactacgaccgtttgaccatcaactcaaacaaccagttcaacctgttcgacgactca
aaggagcgcaacttcctgaacaaactggacatcagcgcaaacctctcttatatgcgcaca
catagcacaggtatcgacaccaactctacatggggttcgcccctgggttcggccctgtac
ctggctcccacactgcccgtaacactcactggtgctgtggctcaggatatgattgaccgt
tacagcgcttacgacctttatcgcgacgagaacggcaatccttatactattcccaactac
gtaggtagctatcaggagcagaacaaccccatcgccatgatgcagggtaaccccagccgc
ggctggagtcataagttcagacctaagtttgctatcgatctgcagatctgggacaacctg
aagtaccacttcacctggagtgccgagcagagtttctggggcagcgagggtgctaccgta
tcaaagtactacctctctggtaacaacaacagcgaccacacatcggcttcagccgagaag
gccgacgctacacagtggcaggttgagaacacgctgacttacgacaaagagtttggcaag
cactctatcggtgtagtactgggtcagagcgccctgaagtacaagggtagctacgtaggt
gcatcgcactggaacctgattaacgtaaacaagccttatgttgactacaccactggtggt
agcattgagaccactaccgatgccgacggccacattacaggtgttaagagtctggttagc
ggttgggctggtcctaacgtagagcatcacctggcttcgctctttgcccgtttgagctac
aactacgacgagaagtacatgttccagggcaccatccgccgcgatggttcaagccgcttc
ggatcaaacaacaaatatggtgtgttcccctcattctctatcggttggaacatcatgaac
gaggacttcatgaagaacaccagcgactggctcagcaacctgaagttccgcgccagctgg
ggtaagaacggtaacgagaacatcggtgacttccgctacaccgtgctcaccaccactggt
ggcacaagcaactactactttggccgtcagggcgtgatgaattacggttcgaaggccaac
ggactggctaacgagaacctgaagtgggaggagagtgagcagaccgacctgggtatcgac
ctgggcctgtggaacaacaagcttacatttactgttgactactatatcaagaagaccaat
ggtatgctgatgaccatgcctatcccaagctacgtaggtgagaccaagcctatcggtaac
gtgggcgacatggagaataagggtatcgagtttgagctgggttacaagttcaacattgcc
gatgcacactttgccattaaggccaacgcatcgcacctgaagaacaccctgaagaacctg
ggtaacgatactggcttcctgaactacggtatcagtcagttcagcgatggtggcacacgt
gccgagaacggtcagcctttcccatacttctatggttacaagactgcaggtgtactgcag
aaccaggccgaggccgatgcttacaatgctaagaatcacgcttcgtcggttcctggcgac
ctgatcttcgtggatgtaaacggtgatggctacattaccagcgacgaccgtaccaagatt
ggtaagccaacacccgactggacttacggtttgaacctgaatgccgattggaagggcttc
gacttcaacatcttcttccagggcgtttatggtgccgatatcttcgacgctacctggcgc
caggatatcgcatcgggtaactacccaacttgggtgctgcagcgctggaccggcgagggc
acatcaaacaagattcctatgctgaagctgggcgacagcaagaactgggtggttagcgac
atctacgtacaggacggcagctacctgcgcctgaagaacatctcattgggttacacactg
cctaagcagcttaccaagcgtgtaaacatcgagcgattccgcgtgtatgttcgcgccgag
aacctcttcacctggaccaagtactggggattcgatcctgagatcggttctggcagcaca
tcaatgggtgtagattacggtgtatatccacaggcacgcatctttactgtaggttgcaac
ctctcgctgtaa
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