Xylanibacter ruminicola: PRU_2485
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Entry
PRU_2485 CDS
T01212
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru03030
DNA replication
pru03410
Base excision repair
pru03420
Nucleotide excision repair
pru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PRU_2485 (polA)
03410 Base excision repair
PRU_2485 (polA)
03420 Nucleotide excision repair
PRU_2485 (polA)
03440 Homologous recombination
PRU_2485 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pru03032
]
PRU_2485 (polA)
03400 DNA repair and recombination proteins [BR:
pru03400
]
PRU_2485 (polA)
Enzymes [BR:
pru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PRU_2485 (polA)
DNA replication proteins [BR:
pru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PRU_2485 (polA)
DNA repair and recombination proteins [BR:
pru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PRU_2485 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PRU_2485 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ADE81354
UniProt:
D5EWK7
LinkDB
All DBs
Position
2999514..3002279
Genome browser
AA seq
921 aa
AA seq
DB search
MQKLFLLDAYALIYRSYYAFIKNPRINSKGLNTSAIMGFLNTLNEVLTKEKPTHIGVAFD
PHGPTFRSEAFPAYKAQREETPEDIRKAVPIIKDLLKAYRIPILQVDGFEADDVIGTLAE
KAGSIGVETYMLTPDKDYGQLVRDNVFIYRPRHGGGYETMGPKEICEKYNIPSPMAVIDL
LALMGDSADNFPGCPGVGEKTAAKLIDEFGSIEQLLARSSEIKGKLREKVEQHVEDIKMS
YFLATIKTDVPIELDMENLKLVEPNEDELGKLLTELEMKSFADRVLKKSQKPQKVVNQQL
DLFAEFATDGQAVNENTSFETLKTTPHNYKLVENQEDLKKLCDYFLTNKILSLDTETTST
SAIDAELVGLSFAVKEFEAFYVPVPANREEALQIVNIFKPAYENPEILKVGQNLKYDLEV
LRNYGIELKGKMWDTMIAHYLIQPELHHNMDYMAEIYLNYQTIHIEELIGPKGKNQKSMR
SLPPSQVYEYAAEDADITLRLKNKLEPELKKAECEDLFYNIEMPLMPVLAEMELNGVCLD
TASLAETSKQFTNRMNEIEARIYELAGEQFNIASPKQVGEILFDKLKIVEKAKKTKTGQY
VTSEEVLQQLRNKHEIVADILEHRGLKKLIGTYIDALPKLINPKTGHIHTSFNQTITATG
RLSSSDPNLQNIPIRGEDGKEIRKAFIPEPGCLFFSADYSQIELRVMAHLSQDAEMIKVF
SEGKDLHAATAANIYKKPIEEVTRDERTKSKRANFGIIYGITVFGLAERLDIPRDEAKML
IDGYFDTFPQVHDYMEKSKEVAREKGYVTTLFGRRRYLPDINSHNATVRGFAERNAINAP
IQGTAADIIKVAMIRIYNRFKAEGIRSKMILQVHDELNFSVYPDEKEKVEGIVLQEMQNA
LNLSVPLVADSGFGKNWLEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaattgttccttttagacgcttacgcactcatttatcgcagctattatgcgttt
atcaaaaacccgcgaatcaactcgaagggcttgaatacgagtgctattatgggattcctg
aacacgctgaacgaggtgctcaccaaagagaaacctacccatatcggcgtggcattcgat
ccccatggtcctacgttccgcagcgaggctttccctgcctataaagcccagcgcgaagaa
acacccgaagatatccgaaaggcagttcctatcattaaagatctgcttaaagcataccgc
atacccatcctgcaagtagatggcttcgaagccgatgatgtgattggtactttggccgaa
aaagccggttccatcggtgttgaaacctatatgctgacacccgataaggactacggacag
ctggtacgcgacaatgtattcatttaccgtccgcgtcatggaggcggttatgaaacaatg
ggcccaaaggagatttgcgagaaatataacatcccctcgcctatggcggtgattgatttg
ctggcgctgatgggcgactcggccgataacttcccgggctgtcctggtgttggcgagaaa
actgccgctaaactcatcgacgagttcggaagcatcgaacagttgttggcacgttcgtca
gaaataaaaggtaagctccgcgaaaaagtggagcaacatgttgaggacatcaagatgagc
tacttcctggcaaccatcaaaaccgatgtacccatcgagctcgatatggaaaatttgaaa
ctcgtggaaccaaacgaggacgaattgggcaaattgctcacagaactggagatgaagagc
ttcgcagacagagttcttaaaaaaagccaaaaaccgcaaaaagtcgtaaatcagcaactc
gatctctttgcagaatttgcgaccgacgggcaagctgtgaacgaaaacacgagttttgag
acgctaaaaactacgcctcacaactacaaactcgttgaaaatcaggaggatttgaagaaa
ctttgtgattatttcttgacaaacaaaattctcagtctagacacggagaccacttcaacc
agcgctatcgacgcagaattggtaggtttgagcttcgccgtaaaggaattcgaggcgttt
tacgtacccgttccagccaatcgtgaagaagcgttgcaaattgttaatatctttaaaccc
gcatacgagaaccccgaaattctaaaagttggtcagaatttgaagtacgacctcgaggtg
ctcagaaattacggcatcgaactgaaaggaaaaatgtgggacacgatgatagcccactat
ctcatccagcccgaactgcatcataacatggactacatggctgagatctatctgaactat
caaaccatccacatcgaagaactcatcggcccaaaaggcaagaaccaaaaatcgatgcgc
tctctcccaccctcacaggtttacgagtatgccgccgaggatgctgatatcacactgcga
ctaaagaataaactggaaccagagttgaagaaggccgagtgcgaagacctattctataat
atagagatgccactgatgcctgtattggctgaaatggagttgaatggtgtttgtttggat
acagcatctctggccgaaacgtcaaaacaattcaccaaccgcatgaacgaaatcgaagcc
cgtatctacgagttggcaggcgaacagtttaacatcgcatcgccaaagcaagttggtgag
atactcttcgacaagctcaagatagtagagaaggccaagaaaactaaaactggacagtat
gttacttcggaagaagttttgcagcaactccgaaacaagcacgagatagttgcagacata
ttggaacacagagggttaaagaagctgataggcacctacatcgatgccctacctaagctt
attaaccctaaaaccggtcatatccacacctcgtttaatcaaacgattaccgctaccgga
cgcttgtcgtcgtccgatcctaacctgcagaatatccccattcgtggtgaggatggcaag
gaaatccgaaaggcattcattccagaaccaggttgtctgttcttttcagccgactatagt
cagattgagctgcgcgttatggctcatctctcgcaggatgccgaaatgataaaagtgttc
agcgagggtaaggatttgcatgccgccacagctgccaatatatacaaaaagcccatcgaa
gaggttacacgcgacgaacgaaccaaatcgaaacgcgccaacttcggtatcatctacggt
ataaccgtatttggacttgctgagcgtctggatatccctcgcgacgaagctaagatgctg
atagacggttacttcgacaccttcccacaggtacacgattatatggaaaaatctaaagaa
gtggctcgcgagaagggttacgtcactaccctattcggtcgtcgccgctatctgccagat
attaacagccacaatgctaccgttcgcggctttgctgagcgaaacgccatcaacgcccca
attcagggcactgctgccgatatcatcaaggtggctatgattcgcatctacaaccgcttt
aaggccgaaggaatacgctctaaaatgattctgcaggtacacgacgaattgaacttctcg
gtgtacccagatgagaaggaaaaagtagagggcatcgtgctccaagagatgcagaatgcc
ctgaacttaagcgtacccctggtggccgattctggctttggcaagaattggctcgaggcg
cactaa
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