Xylanibacter ruminicola: PRU_2627
Help
Entry
PRU_2627 CDS
T01212
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pru
Xylanibacter ruminicola
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pru03032
]
PRU_2627 (topA)
03400 DNA repair and recombination proteins [BR:
pru03400
]
PRU_2627 (topA)
Enzymes [BR:
pru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PRU_2627 (topA)
DNA replication proteins [BR:
pru03032
]
Prokaryotic type
DNA Topoisomerases
PRU_2627 (topA)
DNA repair and recombination proteins [BR:
pru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PRU_2627 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
SBP_bac_3
GemA
DUF5800
Motif
Other DBs
NCBI-ProteinID:
ADE82762
UniProt:
D5EXD2
LinkDB
All DBs
Position
complement(3184306..3186708)
Genome browser
AA seq
800 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGKDYKVMSSYGHIRDLKKREISIDEKTLEPEYEIPEEKV
SLVEDLRSKAGKAETVWLASDEDREGEAISWHLCEVLGLDEQKTNRIVFHEITESAILDA
IEHPRHINMDLVNAQQARRVLDRLVGFKLSPVLWRKVKPALSAGRVQSVAVRLIVERERE
IQNFKSEPYYSVSGVFAVVNPDGSASEVKAQLSKRFSTEDEVMEFLEKCKTATFYADAIT
KKPSKRTPAPPFTTSTLQQEAARKLGFTVSQTMMVAQHLYESGRITYMRTDSVNLSQLCL
NASKSEIVNLYGENYSKLRKYHTNSKGAQEAHEAIRPSYMNMTEIEGSAQERKLYDLIWK
RTIASQMADAEIEKTTITIKSDGIEEVFTAQGEVIKFDGFLKVYRESSDDDENGEDYSHS
LPVIKKGQELTRREILTTERFSAGPQRYTEASLVHKMEELGIGRPSTYAPTISTIQQREY
VMKGDKKGEERFYSIYQLKGKQITQKTRKEMAGSERGKLLPTDIGTVVNDFLMENFPGIM
DYNFTAKVEQDFDKIAEGDEKWKDMMKHFYKDFEPTVEETLNSRQKFKAGERELGNDPKT
GRPVFVKIGRFGPVVQIGSSEDKDKPQFAQLPKELSMETITLEEAMELFKLPRDLGEFEG
LPVSVGAGRFGPYVKHDRMFASLPKDADPMAITLDEAIVLIQEKRRQEAAKHMKFFLEDP
KLEIMNGIYGPYLAYDGQNYRLPKNLHENAKDLTYDECMKIIEQMKSEEGDKKTAKRGAR
KGAGRKAATKKTTTKAEAEA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaacttagtgatagtggagtcgcccgcaaaggcaaagactattgagaaattc
ctgggaaaggattacaaggtcatgtcgagctacggacacatccgcgacttaaagaaaaga
gaaatcagcatcgacgaaaagacgctggaaccagaatacgagattcccgaagagaaggtt
agtctggtagaggatttacgatcaaaagccggcaaggcagagactgtatggctggcatcc
gatgaggaccgcgaaggagaagccatctcatggcacctttgcgaggttttaggattggac
gaacagaagactaaccgtattgtattccacgagattaccgaatcggctattctcgatgcc
atcgagcatccacgccatatcaacatggatttggttaatgcccagcaggcccgccgcgtg
ctcgaccgtctggtaggtttcaaactctcaccagtactttggcgtaaggttaagcccgcc
ctgtcggctggtcgtgtacagagtgttgcagtgcgactgattgtagagcgcgagcgcgag
atacagaattttaagagcgagccttattatagtgtcagcggtgtgtttgctgttgttaac
cccgatggctcagcctcggaggttaaagcccagctgagcaagcgtttcagcaccgaggat
gaagtgatggaattcctggagaagtgcaaaacagccactttctatgccgatgccatcacc
aaaaagccatcaaagcgtacacctgcgcccccattcaccacatctaccctgcaacaggaa
gcagcccgcaagctcggcttcaccgttagtcagacaatgatggtggcccagcacctgtac
gagagcggacgtattacttacatgcgtaccgactctgtaaacctgtcgcaactttgtttg
aacgctagcaagagcgagattgtaaacctctatggcgagaactatagcaaacttcgcaag
tatcacaccaactcaaagggcgctcaggaagcacacgaggccatccgtccatcatacatg
aatatgactgagattgaaggcagtgcccaggagcgtaaactctacgatttgatttggaag
cgtaccatcgccagtcagatggccgatgcggagattgagaagaccactataaccatcaag
agcgatggtatcgaggaggtattcacagctcagggcgaggttatcaagtttgatggtttc
ctgaaagtatatcgtgaatcatccgacgatgacgagaacggcgaggattacagccactca
ctgcctgttatcaagaaaggacaggagctcacacgtcgcgaaatccttaccaccgagcgt
ttcagtgccggtcctcagcgctacaccgaggccagtctggtacacaagatggaagagtta
ggtatcggtcgtccatcaacatacgccccaaccatctctaccatccagcagcgcgagtat
gtgatgaagggtgataagaaaggcgaagagcgtttctactctatctaccagctgaagggt
aagcagattacccagaaaacccgtaaggagatggctggctcagagcgcggcaagctgttg
ccaaccgacattggtactgtagtaaacgacttcctgatggaaaacttccctggcatcatg
gactataactttactgccaaggtagagcaggactttgataagattgccgagggcgacgag
aagtggaaggatatgatgaaacacttctacaaggactttgagccaacggttgaggaaact
cttaacagccgtcagaagttcaaggctggtgagcgcgagttgggtaacgaccccaagact
ggtcgcccagtatttgtaaagattggccgcttcggacctgtagtacagattggctcgtca
gaggataaggacaagcctcagtttgcccagttacctaaggagctgagtatggaaacaatc
accttggaagaggctatggagctgtttaagctgccacgcgacttgggtgagttcgaaggt
ctgcccgtaagcgttggtgctggtagattcggtccttacgttaagcacgaccgcatgttt
gcatcgctgccaaaggatgccgatccaatggctatcacactcgacgaggccattgtgctc
atccaggagaagcgccgacaggaagcagccaagcacatgaagttcttccttgaggatccc
aagctggagattatgaacggtatctacggtccttacctggcctacgacggacagaactat
cgcctgccaaagaacctgcacgagaacgccaaggatcttacctacgacgagtgcatgaag
attatcgagcagatgaagagcgaggagggtgataagaaaaccgccaagcgaggtgcaaga
aaaggtgctggcagaaaggccgccactaagaagacaaccacaaaagcagaggcagaggca
tga
DBGET
integrated database retrieval system
