Xylanibacter ruminicola: PRU_2633
Help
Entry
PRU_2633 CDS
T01212
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pru
Xylanibacter ruminicola
Pathway
pru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PRU_2633 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pru03019
]
PRU_2633 (pnp)
03016 Transfer RNA biogenesis [BR:
pru03016
]
PRU_2633 (pnp)
Enzymes [BR:
pru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PRU_2633 (pnp)
Messenger RNA biogenesis [BR:
pru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PRU_2633 (pnp)
Transfer RNA biogenesis [BR:
pru03016
]
Prokaryotic type
tRNA degradation factors
PRU_2633 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
ATP-cone
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ADE82211
UniProt:
D5EXD8
LinkDB
All DBs
Position
3191409..3193787
Genome browser
AA seq
792 aa
AA seq
DB search
MNVITKTLQLADGRTITIETGKVAKQTDGSVVLRMNNTVLLATVCAAKDAVPGTDFMPLQ
VDYREQYSAAGRFPGGFTKREGKASDNEILTSRLVDRVLRPLFPSNYHAEVFVNVMLLSA
DGIDQPDALAGFAASAALACSDIPFECPISEVRVARVNGEYVIDPTFEQMKNADMDIMVG
ASAENIMMVEGEMKEVSEQDMIGALKAAMAAIKPMCELQAELSKELGKDVKREYDHEVND
EELRERMSKELYQPAYDVTKQALPKQDRADAFEKILTDFKEKYAAEHADLTEDELEEKYA
MMERYYHDVERDAMRRCILDEGIRLDGRKTDEIRPIWCEVSPLPMPHGSSIFTRGETQSL
STCTLGTKLDEKMVDDVLEHGYQRFLLHYNFPPFCTGEAKAQRGVGRREIGHGHLAWRGL
KGQIPEDFPYTVRLVSQILESNGSSSMATVCAGTLALMDAGVPMKKPVSGIAMGLIKNPG
EDKYAVLSDILGDEDHLGDMDFKTTGTKDGLTATQMDIKCDGLSFDILEKALMQAKAGRE
HILKCLTDTIAEPRAEMKPQVPRIVQMEIPKEFIGAVIGPGGKIIQQMQEDTGATITIDE
VDGVGKVQVSAPNKESIDAAIGKIKAIVAIPEVGEVYDGVVRSIMPYGCFVEIMPGKDGL
LHISEIDWKRLETVEEAGIKEGDHIQVKLLEIDPKTGKYKLSHRVLIEKPADYVERPARG
ERRERPERNGERRDRRPDRGDRRNGERHGERQRVGDSSESGMRRPRPEQQQTEAPKEEKP
KDFSDSLDNMDF
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattacaaagacccttcaattggctgatggacgtaccatcaccattgaaacc
gggaaagtggcaaaacagaccgacggctctgttgttctgcgtatgaacaacaccgtattg
ctcgccactgtttgtgccgcaaaagatgcagttcccggaacagattttatgcctttgcag
gtagattatcgtgaacagtacagcgcagccggacgtttccccggtggatttaccaagcgc
gaaggcaaagccagcgacaacgaaatcctgacatcacgactggtggaccgtgttcttcgt
ccactcttcccttcgaactatcacgctgaggtatttgtgaatgtaatgctgctctcagcc
gatggtattgatcagcccgacgcccttgcaggttttgctgcttcggctgctctggcttgc
tcggatatcccattcgagtgccccatcagtgaggttcgcgtagcccgtgtcaacggtgag
tatgttatcgatcctaccttcgagcagatgaagaatgccgatatggacatcatggttggt
gcatcggccgagaacattatgatggtagagggagagatgaaagaggtgtcagaacaggat
atgatcggcgctctgaaggctgctatggctgctatcaagccaatgtgtgagcttcaggct
gaactctcaaaggaacttggtaaggatgttaagcgtgagtacgaccacgaggtgaacgat
gaggagctgcgtgagcgtatgagcaaggagctgtatcagcccgcttacgatgttaccaag
caggctctgcccaagcaggaccgtgctgatgccttcgagaagatcctgacagacttcaag
gagaagtatgctgctgagcatgccgatctgactgaggatgagctcgaggagaagtacgct
atgatggagcgttactatcacgacgttgagcgcgacgctatgcgccgttgtatcctcgac
gagggtatccgtctcgatggtcgtaagaccgacgagatccgtcctatctggtgcgaggtt
tcgcctctgccaatgcctcacggaagttcaatctttactcgtggtgagacacagtcgctt
tctacctgtactctgggtactaagctcgatgagaagatggttgacgacgtgcttgagcat
ggttatcagcgcttcttgctgcactataacttccctccattctgtactggtgaggccaag
gcccagcgtggcgtaggtcgtcgtgagattggtcacggtcacctggcatggcgtggactg
aagggccagattcctgaggacttcccttacacagttcgtctggtaagccagatccttgag
tctaacggttcttcatcaatggctaccgtatgtgctggtacactcgccctgatggatgct
ggtgttcctatgaagaagcctgtttcgggtatcgccatgggtctgattaagaatcctgga
gaagataagtacgctgtattgagcgatatcctcggcgacgaggaccacctgggtgatatg
gacttcaagaccactggtacaaaggatggtctgaccgctactcagatggatatcaagtgt
gatggtttgagcttcgacattctcgagaaggctctgatgcaggctaaggccggtcgtgag
catatcctgaagtgcctgaccgatactatcgctgagccacgtgctgagatgaagcctcag
gttcctcgcatcgttcagatggagattcctaaggagttcatcggtgctgtaatcggccct
ggtggtaagattatccagcagatgcaggaggatactggtgctactatcactatcgacgag
gttgacggtgtaggtaaggtccaggtatcagctcctaacaaggagagcatcgatgccgct
atcggtaagattaaggctatcgtagctattcctgaggtaggcgaggtttacgacggtgtg
gttcgttctatcatgccttacggatgcttcgttgagattatgcctggtaaggacggtctg
ttgcacatcagcgagatcgactggaagcgccttgagaccgttgaagaggctggtatcaag
gagggcgaccacattcaggttaagctcctggagattgatcctaagacaggtaagtacaag
ctctctcatcgtgtactgattgagaagcctgccgattatgttgagcgtcctgcccgtggt
gagcgtcgtgagcgcccagagcgtaatggcgagcgtcgtgaccgtcgtcccgaccgtggc
gatcgtcgcaacggtgagcgtcatggtgaaaggcaacgggtaggcgattcgtcagaatcg
ggaatgcgccgcccacgtcctgagcagcagcagactgaggctccaaaagaggaaaagcca
aaggacttcagcgactcgttagataacatggatttctaa
DBGET
integrated database retrieval system
