Candidatus Phytoplasma rubi: RS022_00630
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Entry
RS022_00630 CDS
T08734
Name
(GenBank) 3'-to-5' oligoribonuclease
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
prub
Candidatus Phytoplasma rubi
Pathway
prub01100
Metabolic pathways
prub01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
prub00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
RS022_00630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prub03400
]
RS022_00630
Enzymes [BR:
prub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
RS022_00630
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
RS022_00630
DNA repair and recombination proteins [BR:
prub03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
RS022_00630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WAN63074
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All DBs
Position
complement(59489..60436)
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AA seq
315 aa
AA seq
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MKFIKKQIEMNDTIIIHGHKKPDGDCYGSQFGLKDIIMTTYPNKKVYVVGEEEPKLSFLG
IKDKITDDTYKEALVFVVDCGQNSVISDHRYKLGKMIIRIDHHLFIEKIGEYEWIDSNFA
SCSEMIYHFKEYHNLKLTKKGALPIYTGIVTDTGNFRFSRVNSNTLKYGASLLEYGFDVF
EIDQKINFKSLDLLKFQGYVCNNCVTEEGLIYFKFSSQTIQQFKINIEQAFSILNILSYV
ENNPVWAFIFELPNGNFKLSIRTQGPEISDIAHQFGGGGHKKACGVILKTNEQLNGIIQL
IKESIKKFNFENNPK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattaaaaaacaaattgaaatgaatgatacaattattattcatggtcataaa
aaacctgatggagattgttatggttctcaattcggtttaaaagatataattatgaccact
tatcccaataaaaaagtttatgttgttggagaagaagagcctaaattatcctttttaggt
atcaaagataaaataacagatgatacttataaagaagctttagtatttgttgtcgattgt
ggacaaaattcagtgatcagcgatcatagatataaattaggaaaaatgattattagaatt
gatcatcatttatttatagaaaaaattggtgaatatgaatggatcgatagtaatttcgct
tcttgttcagaaatgatttatcattttaaagaatatcataatttaaaattaactaaaaaa
ggagctttacctatatatacaggtatagtcactgatacaggtaatttccgtttctcaaga
gtcaattctaatactttaaaatatggagctagtttattagaatatggttttgatgttttt
gaaatcgatcaaaaaataaattttaaaagtttagatttattaaaatttcaaggctatgta
tgcaataattgtgttactgaagaaggtttaatttattttaaattttctagtcaaaccatt
caacaatttaagataaatattgaacaagctttttccattttaaatattttaagttatgtt
gaaaataatcccgtatgggcatttattttcgaattacctaatggtaattttaaattgagt
attcgtactcaaggcccagaaataagtgatatcgctcatcaatttggtggtggtggtcat
aaaaaagcttgtggagttattcttaaaacaaacgaacaattaaatggaattattcaatta
ataaaagaatctattaaaaaatttaattttgaaaataatccaaaataa
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