Candidatus Phytoplasma rubi: RS022_02920
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Entry
RS022_02920 CDS
T08734
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
prub
Candidatus Phytoplasma rubi
Pathway
prub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RS022_02920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prub03400
]
RS022_02920
Enzymes [BR:
prub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RS022_02920
DNA repair and recombination proteins [BR:
prub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RS022_02920
Prokaryotic type
RS022_02920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
MYG1_exonuc
Motif
Other DBs
NCBI-ProteinID:
WAN63242
LinkDB
All DBs
Position
240277..240927
Genome browser
AA seq
216 aa
AA seq
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MTWKELIYQERQKKYFQNIINFLEGEFKIKKQIYPPLKKIFEAFIMTPFEDVKVVILGQD
PYFNINQAHGLSFSVKNKKTPASLRNIFKELRNDLNLISKTNNLTLWAERGVFLLNSILT
VEAGKPLSHKNIGWKEFTKNIFKFLNKKEKIVYILWGKIAQEYIKYIDIDKNYILKSPHP
SPFSAYKGFFGSKPFSKTNFYLIKNHILPIYWDLNK
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgacatggaaagaattaatttatcaagaaagacaaaaaaaatattttcaaaatataatt
aattttttagaaggtgaatttaaaataaaaaaacaaatttatcctcctttgaaaaaaatt
ttcgaagcttttattatgactccttttgaagatgtcaaagtagttatattaggacaagat
ccttatttcaatataaatcaagctcatggtttatcttttagtgttaaaaataaaaaaact
cctgctagtttgagaaatattttcaaagaattaagaaatgatttgaatttaatatcaaaa
actaataatttaactttatgggctgaaagaggtgtttttttattaaatagtattttaaca
gttgaagcaggaaaacctttaagtcataaaaatattggatggaaagagtttactaaaaat
atttttaaatttttaaataaaaaagaaaaaatagtttatattttatgggggaaaatagcc
caagaatatattaaatatattgatatagataaaaattatattttaaaaagccctcatcct
tctccattttcagcttataaaggttttttcggttctaaacctttttctaaaactaatttt
tatttaattaaaaaccatatcttacctatttattgggatttgaataaataa
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