Candidatus Phytoplasma rubi: RS022_03590
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Entry
RS022_03590 CDS
T08734
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
prub
Candidatus Phytoplasma rubi
Brite
KEGG Orthology (KO) [BR:
prub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prub03019
]
RS022_03590
Messenger RNA biogenesis [BR:
prub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RS022_03590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
Motif
Other DBs
NCBI-ProteinID:
WAN63287
UniProt:
A0ABY7BRG1
LinkDB
All DBs
Position
293331..294266
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AA seq
311 aa
AA seq
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MNQNLFLKNKKIGDTIEFIGKITSINKGGHFFNIDLLLIEDFVVNIKIDLSFLTPEKEKI
YFFKTKYKEKNEKNILLCEEYDIIENVLNLEQVFSYYKHFFKCSPLSFHTIDKKINNFLS
KIQNPILKKITHNLYSKNKIKFLIYPAACKMHHDYYGGLSYHTLNMLNISNHYVTIYPFL
NQDLLNCGIILHDMAKIIEFDFLSKTYTKKGKLLGHLILGVNYVHEEALSLGFQDKEETL
LLKHLLISHHGLLQYGAAKEPQIGEALLLWYLDDIDAKLNTLNENIKEAEKGEFTENLSV
IKGRSFYKPNL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaacttatttttaaaaaataaaaaaataggtgatacaattgaatttattgga
aaaataactagtattaataaaggggggcatttttttaatattgatcttttattaatagaa
gattttgttgttaatatcaaaatagatttatcatttctgacacccgaaaaagaaaaaatt
tatttttttaaaacaaaatataaagaaaaaaatgaaaaaaatattttattatgtgaagaa
tatgatatcatcgaaaatgttttaaatttagaacaagtctttagttattataaacacttt
tttaaatgttctcctctttctttccatacaatcgataaaaaaataaataattttttatct
aaaattcaaaatcctattttaaaaaaaataactcataatttatactctaaaaataagata
aaatttttaatttatccagcagcttgtaaaatgcatcatgattattatggaggcctaagt
tatcatactcttaatatgttgaacatatctaatcattatgtcacgatatatcctttttta
aatcaagatttattaaattgtggaattattcttcatgatatggcgaaaataatagaattt
gattttttatccaaaacttatacaaaaaaaggaaaattattaggacatttaattttagga
gtcaattatgttcatgaagaagctctttcactaggatttcaagataaagaagaaactttg
cttttaaaacatttattaatttctcatcatggtttattacaatatggtgccgctaaagaa
ccacaaatcggagaagctcttttattatggtatttagatgatatagatgctaaattaaat
actttaaatgaaaacataaaagaagctgaaaaaggagaatttactgaaaatttatctgtc
ataaaaggaagatcattttataaacctaatttataa
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