Candidatus Phytoplasma rubi: RS022_03860
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Entry
RS022_03860 CDS
T08734
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
prub
Candidatus Phytoplasma rubi
Brite
KEGG Orthology (KO) [BR:
prub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prub03032
]
RS022_03860
03036 Chromosome and associated proteins [BR:
prub03036
]
RS022_03860
03400 DNA repair and recombination proteins [BR:
prub03400
]
RS022_03860
DNA replication proteins [BR:
prub03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RS022_03860
Chromosome and associated proteins [BR:
prub03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RS022_03860
DNA repair and recombination proteins [BR:
prub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RS022_03860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Kre28
Phage_tail_terminator_7
Motif
Other DBs
NCBI-ProteinID:
WAN63310
LinkDB
All DBs
Position
complement(313144..313434)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKKELIKKIALANKTSVTKTEEFYNIFENNLINAITKNEEVVLFPKIGKFKLKSRKAYI
GRNPKTKKKLKIPAKTVVTFKLSKTIKDKVKTLILK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaagaattaattaaaaaaatcgctttagctaacaaaacttccgtaactaaa
actgaagaattttataatatcttcgaaaataatttaatcaacgctatcactaagaacgaa
gaagtagttttatttcctaaaataggcaaatttaaattaaaatcaagaaaagcctacatc
ggtagaaaccctaaaacaaagaaaaaattaaaaatccctgccaaaacagtagtcactttc
aaactttctaaaaccatcaaagacaaagttaaaactttaattttaaaataa
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