KEGG   Candidatus Phytoplasma rubi: RS022_04640
Entry
RS022_04640       CDS       T08734                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
prub  Candidatus Phytoplasma rubi
Brite
KEGG Orthology (KO) [BR:prub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:prub03032]
    RS022_04640
   03036 Chromosome and associated proteins [BR:prub03036]
    RS022_04640
   03400 DNA repair and recombination proteins [BR:prub03400]
    RS022_04640
DNA replication proteins [BR:prub03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RS022_04640
Chromosome and associated proteins [BR:prub03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    RS022_04640
DNA repair and recombination proteins [BR:prub03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      RS022_04640
SSDB
Motif
Pfam: Bac_DNA_binding Kre28 Phage_tail_terminator_7
Other DBs
NCBI-ProteinID: WAN63360
LinkDB
Position
complement(370560..370850)
AA seq 96 aa
MTKKELIKKIALANKTSVTKTEEFYNIFENNLINAITKNEEVVLFPKIGKFKLKSRKAYI
GRNPKTKKKLKIPAKTVVTFKLSKTIKDKVKTLILK
NT seq 291 nt   +upstreamnt  +downstreamnt
atgacaaaaaaagaattaattaaaaaaatcgctttagctaacaaaacttccgtaactaaa
actgaagaattttataatatcttcgaaaataatttaatcaacgctatcactaagaacgaa
gaagtagttttatttcctaaaataggcaaatttaaattaaaatcaagaaaagcctacatc
ggtagaaaccctaaaacaaagaaaaaattaaaaatccctgccaaaacagtagtcactttc
aaactttctaaaaccatcaaagacaaagtgaaaactttaattttaaaataa

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