Candidatus Phytoplasma rubi: RS022_07690
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Entry
RS022_07690 CDS
T08734
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
prub
Candidatus Phytoplasma rubi
Brite
KEGG Orthology (KO) [BR:
prub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prub03032
]
RS022_07690
03400 DNA repair and recombination proteins [BR:
prub03400
]
RS022_07690
Enzymes [BR:
prub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RS022_07690
DNA replication proteins [BR:
prub03032
]
Prokaryotic type
DNA Topoisomerases
RS022_07690
DNA repair and recombination proteins [BR:
prub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RS022_07690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WAN63590
LinkDB
All DBs
Position
complement(603603..606122)
Genome browser
AA seq
839 aa
AA seq
DB search
MSNKIKKNNSLNNSNSDISEINNIGSVKEVNISQEMEKSFLDYAMSVIVSRALPEIQDGL
KPVQRRIIYSMKELGVTSQTSYKKAARIVGDVMGKYHPHGDSSIYEAMVRMAQNFNYRYP
LIDGHGNFGSIDGDSAAAMRYTEVRMSKIAMELIKEIDQNTIDFVDNYDGSEKEPVILPT
SFPNLLVNGATGIAVGMATNIPSHNLGEVIDALNAYINNKEISISELVTYIKGPDFPTGG
EILEVDKFQEIYEKGRGKIIIRSKINIVTSEKNKSSIIITEIPYQMKKSNLIKNIVSLQK
NKILEGITDLRDESSNRQGIKIVIDLRKDINPKIFLNNLYKRSQVQVSFHFNMIVLINKK
PQLVNLKQILEAFFTFRINIINRQKQFELKNALSKKHLIQSAVIVLNDIDDAIELIKSSS
NVKEAREKLMLKYNFDEIQSKYILEMSLQKITNLEVEKIKTEEQNLIKQILECEIIINSQ
TKKEQILKKELLQLKKVFQDERQTLIRKDVEINISEETLIQENSILITITNKGYIKRLDL
DTYKKQNKGGTGVSGITMNENDFVKHIVITSTHDYQLFFTNKGKVYRMKGYEIPDYSRQA
KGIPLINLIPLSEGEFLTSVTSINPHLKQEHNYLVLITKKGLIKRNNISDYQNIQSKGKI
AFTLKNDDEVLTVLKSSGEQDIIMASSDGKAIRFNEKTIKQTSRMGSGVIGMKLNSDETL
IGATIVESNKQDILVVTELGYGKKNKINEYKNQKRGGKGIKTLKITSKNGKIIALKAVFN
DEELVLISDRGKIIRLVNNNKIPTPKSKVTQGNKLVKLKDSDKLFNFVIINDKEKIDIL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaaattaaaaaaaacaattctttaaataattcgaattctgatatttcagaa
ataaataatataggatctgttaaagaagtaaatattagtcaagaaatggaaaaatctttt
ttagattacgccatgagtgttattgtttcaagagctttaccagaaattcaagatggttta
aaacctgttcaaagaagaattatatatagtatgaaagaattaggtgtcacttcgcaaact
agttacaaaaaagctgctagaattgtcggtgatgttatgggtaaatatcatcctcatggt
gatagtagtatttatgaagcaatggtaagaatggcgcaaaattttaattatcgctatcct
ttaattgatgggcacggtaactttggttctattgatggagattctgctgcggcaatgcgt
tatacagaagtacgtatgtcaaaaatagcaatggaattaattaaagaaatagatcagaac
actattgattttgtagataattatgatggaagcgaaaaagaaccagtaattcttccgaca
agttttcctaatcttttagtaaatggagcaacgggtatagctgtaggaatggctactaat
attccttctcataatttaggtgaagttattgatgctttgaatgcttatataaataataaa
gagatttctatttctgaattagttacatatattaaaggtcctgattttcctactggtgga
gaaattttagaagttgataaattccaagaaatttatgaaaaaggaagaggaaaaattatt
attcgttctaaaattaatattgtgacttctgaaaaaaataaaagttcgataattattaca
gaaattccttatcaaatgaaaaaaagtaatttaattaaaaatattgtttctttgcagaaa
aacaaaattttagagggaattacagatttaagagacgagtcttctaatcgccaaggtatt
aaaattgttattgatttaagaaaagacattaatcctaaaatatttttaaataatttgtat
aaacgttctcaagtacaagtatcttttcattttaatatgattgttttaattaataaaaaa
cctcaacttgttaatttgaaacaaatcttagaagcttttttcacttttagaataaatata
attaatcgtcaaaaacaatttgaattaaaaaacgctttatcaaaaaaacatttaattcaa
tcagcggtaattgttttaaatgatattgatgacgcaattgaattaataaaaagttctagt
aatgttaaagaagcacgtgaaaaattaatgttaaaatataattttgatgaaattcaaagt
aaatatattttagagatgagtttacaaaaaataacaaatttagaagtagaaaaaataaaa
acagaagaacaaaatttaattaaacaaattttagaatgtgaaattattattaattctcaa
actaaaaaagaacaaattcttaaaaaagaattgctgcaattaaaaaaggtttttcaagac
gaaagacaaactttaataagaaaagatgtagaaattaatatatctgaagaaactttaatt
caagaaaattctattcttattactattactaataaaggttacatcaaacgtttagattta
gatacttataaaaaacaaaataaaggcggaactggtgttagcggaatcactatgaatgaa
aatgatttcgtaaaacatatagttattacttctactcatgattatcaattattttttaca
aacaaagggaaagtttaccgcatgaagggttacgaaatacctgattattctcgacaagca
aaaggtataccacttatcaatttaattcctttaagtgaaggagaatttttaacttctgtt
acaagtattaaccctcatttaaagcaagaacataattatttagttctaataactaaaaaa
ggtttaataaaaagaaataatatttcagattatcaaaatattcaaagtaaaggcaaaata
gctttcactttaaaaaatgatgatgaagttttgacagttttaaaaagttcaggcgaacaa
gatattattatggcgagttctgatggtaaagctattcgttttaacgaaaaaactattaaa
caaactagtagaatgggtagtggagttattggaatgaaattaaattctgatgaaactttg
ataggagctacaattgttgaatcaaataaacaagatattttagttgttactgaattagga
tatggtaagaaaaataaaattaacgaatataaaaatcaaaaaagaggcggaaaaggcata
aaaactttaaaaattacttctaaaaatggtaaaattattgcattaaaagctgtttttaat
gacgaagaattagttttaatttctgatcgtggcaaaataattagattagttaacaataac
aaaattccaactcctaaatccaaagtaactcaaggaaataaattagttaaattaaaagat
tccgataaattatttaattttgttattatcaatgataaagaaaaaatagatattttgtaa
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