Candidatus Phytoplasma rubi: RS022_08600
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Entry
RS022_08600 CDS
T08734
Name
(GenBank) Heat shock protein 60 kDa family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
prub
Candidatus Phytoplasma rubi
Pathway
prub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RS022_08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prub03019
]
RS022_08600
03110 Chaperones and folding catalysts [BR:
prub03110
]
RS022_08600
03029 Mitochondrial biogenesis [BR:
prub03029
]
RS022_08600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prub04147
]
RS022_08600
Enzymes [BR:
prub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RS022_08600
Messenger RNA biogenesis [BR:
prub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RS022_08600
Chaperones and folding catalysts [BR:
prub03110
]
Heat shock proteins
HSP60 / Chaperonin
RS022_08600
Mitochondrial biogenesis [BR:
prub03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RS022_08600
Exosome [BR:
prub04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RS022_08600
Exosomal proteins of other body fluids (saliva and urine)
RS022_08600
Exosomal proteins of breast cancer cells
RS022_08600
Exosomal proteins of colorectal cancer cells
RS022_08600
Exosomal proteins of bladder cancer cells
RS022_08600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AP1AR
IntS11_C
Motif
Other DBs
NCBI-ProteinID:
WAN63655
UniProt:
A0ABY7BTD8
LinkDB
All DBs
Position
complement(700417..702033)
Genome browser
AA seq
538 aa
AA seq
DB search
MAAKSILFGKDARKEILNGVDILADTVKVTLGPNGKNVALEKSNGLSFIVNDGVTIAKEI
ELTEPFQNMGAQLLREAATKTNDNAGDGTTTAIVLAQSMIQKGFKFVNSGAQSVLVKKGI
LKASQKVIEQILEKSKPISTQEEIANIAILSSGSKEIGEIIVSAINKVTQKGIISIGESK
GLETELEVVEGMQYDKGYLSSIFVNKLANMSVEFERALILVTDHKINNINEINHLLEEVK
AKTQSLLIIANSFDNDVINILALNKFHGILNIAATEAPGFGDNQKELLKDIAILTKANFI
SKDLDMQLQNIKIEDLGQIKRAIIKKDNTILMGADKSPSLTKRIEEIENHIQNTNNEHEL
SNLKSRLAKLSGGVAVIKVGAATEIELKERKLRLEDALNAAQAAVTEGILVGGGKTLVEI
YKVLKETLKDSNSDIQKGINVVLDSLLIPTYQISKNSGFNGDLVVKEQLKQKENFGFNAE
TGEYVDLFKEGIIDPTKVTKQAILNSASIASMFVTTEAAVTSAKEKKDFSQISDNNLF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaatcgattctttttggcaaagatgccagaaaagaaattttaaatggagta
gatattttagcagacactgttaaagttactttaggtcctaacggaaaaaatgttgcttta
gaaaaaagcaatggattgtcttttattgttaatgatggtgttacaatcgctaaagaaata
gagttaacagaaccttttcaaaatatgggagcacaattattacgtgaggctgctacaaaa
actaacgataatgctggagatggaacaacaacagcaattgttttagctcaaagtatgatt
caaaaaggttttaaatttgttaattctggtgctcaatctgttctagttaaaaaaggaatt
cttaaagcttcacaaaaagtcatagaacaaattttagaaaaatctaaaccaatttctaca
caagaagaaatagctaatatcgctatactttcttcaggtagtaaagaaataggagaaatt
atagtttctgcaataaataaagttactcaaaaaggaataattagcataggagaatctaaa
ggtttagaaactgaattagaagttgttgaaggaatgcaatatgataaaggttatttatca
agtattttcgttaataaattggccaatatgtcagtcgaattcgaaagagcattaattttg
gtaactgatcataaaattaataacattaatgaaattaatcatttattggaagaagttaaa
gcaaaaactcaatctttgttaattatagctaattcgtttgataacgatgtaattaatatt
ttggcgctaaataagtttcatggtattttaaatattgctgctactgaagcccctggtttc
ggagataatcaaaaagaattattaaaagatatcgctattttaactaaagctaattttatt
tctaaagatttagatatgcaattacaaaatataaaaatagaagatttaggccaaattaaa
agagcaattatcaaaaaagataatacaatattaatgggggcggataaaagtccctcttta
accaaaagaattgaagaaatagaaaatcatattcaaaatacaaataatgaacatgaatta
agcaatttaaaatctcgtttagctaaattatctggtggagtagctgttattaaagtaggg
gcagctacagaaatagaactaaaagaacgaaaattaaggcttgaagacgctttaaatgct
gctcaagctgctgttactgaaggtattttagttggcggtggaaaaactttagtagaaatt
tataaagttttaaaagaaactttaaaagattctaattcggatattcaaaaaggaataaat
gttgttttagatagtttattaattccaacttatcaaatttccaaaaattcaggttttaat
ggagatttagttgttaaagaacaattgaaacaaaaagaaaattttggatttaatgctgaa
acaggagaatatgttgatttatttaaagaaggaatcattgatcctactaaagtgacaaaa
caagctattttaaattctgcatctatcgcttctatgtttgttactactgaagcagctgtt
acttctgcgaaagaaaaaaaagatttttctcagatttcagataataatcttttttaa
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