Paenibacillus sp. RUD330: CIC07_01150
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Entry
CIC07_01150 CDS
T11330
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
prud Paenibacillus sp. RUD330
Pathway
prud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIC07_01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prud03019
]
CIC07_01150
03009 Ribosome biogenesis [BR:
prud03009
]
CIC07_01150
Enzymes [BR:
prud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CIC07_01150
Messenger RNA biogenesis [BR:
prud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CIC07_01150
Ribosome biogenesis [BR:
prud03009
]
Prokaryotic type
rRNA helicases
CIC07_01150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ASS64869
UniProt:
A0AAC9V3T5
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Position
2092413..2094008
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AA seq
531 aa
AA seq
DB search
MKTFAEFGLDPKVLQAITELGFEESTPIQDKSIPIAMSGSDMIGQAQTGTGKTAAFGIPL
INKIPSSEERIVALIMTPTRELAIQVAEEIGKLSRFKGTRSLPIYGGQEIGRQIRALKKR
PQIIIGTPGRLLDHINRKTIKLDDVQTVVLDEADEMLDMGFMEDITSILSLVPEERQTML
FSATMPPNIQRLAQQFLKNPEHVSVIPKQVSAPLIAQAYIEVHERQKFDALSRLLDMESP
ELAIIFGRTKRRVDELSEALQKRGYSADGLHGDLSQNQRDNVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGTAWSFVTPRETDHLHFIEKVTR
QRISKKPVPSLAEAIEGKQRITAERILEIAQSESFQEYKGIAIQLLEQYDSVNLLASAIK
LITGEKKDVNVELTPEDPIRAKKRRPDVRSSGRRFSGSGYGGGGSRSGSTGGSGPRGRSS
YGSGGGSSYGGNRSSSSRDGYKPRTEGSRGYEGRSYENRSSSSETRRPTEG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacatttgctgaatttggcctcgaccctaaggtgttgcaggcaattacagagctt
gggttcgaggaatccacgcctattcaagacaagtccattccgatcgcgatgagcggcagc
gatatgattggccaagcacagaccggtacaggcaagacagcggcgttcggtattccgctg
atcaacaagattccatccagcgaagaacgcatcgtggctctgatcatgacgccgacccgc
gagctggccatccaggtggccgaagaaatcggcaagctctcccgcttcaagggaacccgt
tcccttcctatctacggcggtcaggaaatcggacgccagatccgcgctctgaagaagcgc
ccgcaaatcattatcggtactccaggacgtcttcttgaccatatcaaccgcaagacgatc
aagctggacgatgtccagaccgtcgtcctcgacgaggcggatgaaatgctggacatgggc
ttcatggaagacatcacgtcgattttgagcctcgtgcctgaagagcgccagacgatgctc
ttctccgcgacgatgcctccgaacatccagcgtcttgcccagcagttcctcaaaaatccg
gagcatgtatccgtcattccgaagcaagtcagcgcgccgctgatcgcccaggcctacatc
gaggtccacgagcgccagaaattcgacgccttgagccgcctgctcgatatggaaagccct
gagctcgccatcatcttcggacgcacgaagcgccgggtagacgagctgagcgaagctctg
cagaagcgcggctattccgcggacggactgcacggcgacctgtcccagaaccagcgcgac
aacgtcatgcgcaagttccgcgacggcagcatcgacgtcctcgtggcgacggacgttgcg
gcacgcggtctcgacgtatcgggcgtaacgcatgtcatcaacttcgaccttccgcaggat
ccggagagctacgtccaccggatcggccgtaccggccgtgcaggcaaggaaggaacggca
tggagcttcgtgacgccgcgcgagacggaccaccttcacttcatcgagaaggttacccgc
cagcgcatctcgaagaagccggtgcctagccttgcagaggcaatcgaaggcaagcagcgc
attacagccgagcgcatccttgaaatcgcgcaaagcgagagcttccaggaatacaaaggc
attgcgatccagcttctggagcagtacgattccgtcaatctgctcgcctcggcgatcaag
ctgatcactggcgagaagaaggatgtcaacgtcgagcttactcctgaagatccgatccgc
gccaaaaagcgccgtccggacgtccgctccagcggccgccggttctccggcagcggttat
ggcggcggcggcagccgcagcggcagcacgggcggcagcggtcctcgcggacgcagcagc
tacggcagcggcggcggcagcagctacggcggcaaccgcagcagcagcagccgtgacggc
tacaagccaagaacggaaggcagccgcggttatgaaggccgcagctatgagaatcgcagc
agcagcagcgaaacgcgccgtccgacggaaggttga
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