Paenibacillus sp. RUD330: CIC07_03440
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Entry
CIC07_03440 CDS
T11330
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
prud Paenibacillus sp. RUD330
Brite
KEGG Orthology (KO) [BR:
prud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prud03016
]
CIC07_03440 (rnz)
Enzymes [BR:
prud01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CIC07_03440 (rnz)
Transfer RNA biogenesis [BR:
prud03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CIC07_03440 (rnz)
Prokaryotic type
CIC07_03440 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ASS65278
LinkDB
All DBs
Position
2566717..2567673
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AA seq
318 aa
AA seq
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MELTLLGTGAGRPSRLRNVTSVALTLPQPRCSVWLFDCGEATQHQLMRTPLKMSKVEAVF
ITHMHGDHVNGLPGLLSSRSYHPGAGKLRLFGPEGIREYVQAVFRLTASHLDYELEITEL
APGVVYEDELYAVEADRLDHRVASWGYRIVEKDKPGALDSAKARSLGVPFGPQLGLLKQG
KDITLDDGRVIRSGDVLGPALPGRIVTVLGDTVPCPAISRLAKNADLLVHEATFEGAMAD
KAKAYGHSTTLQAAAAAAEAGARRLVMTHFSSRYRDEDMPALVAEARGIFAESYAGADLL
TVPIPRQGEDEPEGSCWI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaactgacgttattgggaaccggcgccggcaggccctcgcgcctgcgcaacgtgacc
tccgttgccctgacgcttccgcagccgcgctgctcggtgtggctgttcgactgcggagag
gcgacccagcatcagctgatgcgcactccgctcaagatgagcaaggtcgaagccgtgttc
atcactcatatgcacggggatcatgtcaacggcttgcccggactgctcagcagccgctcc
taccaccccggggcaggcaagctccgtctgttcggaccggaaggaatccgcgagtatgtg
caggccgtcttccggctgacagcctcgcatctggactatgagctcgagatcaccgagctg
gcgcccggcgtcgtctacgaggatgagctgtatgccgtcgaagcggacaggctggatcat
cgggtggcgagctgggggtaccggatcgtcgagaaggacaagcccggcgccctcgactcc
gccaaggcgcgctcgttaggcgtcccgttcggccctcagctcgggctgctcaagcaagga
aaggacatcacgctcgacgacggacgcgtcatccgcagcggcgacgtgcttggacctgca
ttgccggggcggatcgtcaccgtcctcggcgatacggttccttgcccggcgatatcacgc
ctggccaagaatgcggatctgcttgtccacgaggcgacgtttgaaggggcgatggcggac
aaagcgaaggcgtacgggcattccacgacgctccaggcggccgccgccgcagccgaagcg
ggcgcgcgcaggctggtcatgacgcatttcagcagccgctaccgcgacgaggacatgccg
gcgctggtcgccgaggcgcgcggcatctttgcggaatcctacgcgggagccgaccttctg
accgtccctattcccagacagggtgaagacgagccggagggctcctgctggatttga
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