Paenibacillus sp. RUD330: CIC07_05555 Help Entry CIC07_05555       CDS       T11330                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism prud  Paenibacillus sp. RUD330 Pathway prud03018   RNA degradation Brite KEGG Orthology (KO) [BR:prud00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CIC07_05555  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:prud03019]     CIC07_05555 Messenger RNA biogenesis [BR:prud03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      CIC07_05555 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF2201 Motif Other DBs NCBI-ProteinID:  ASS65660 LinkDB All DBs Position complement(3052416..3054095) Genome browser AA seq 559 aa AA seqDB search MSKKNTQDKLLIFALGGVGEIGKNMYVIQYGNDIVVVDSGLKFPEEDMLGIDIVIPDITY LTDNRDKVRGIVITHGHEDHIGGLPYVLRHLNVPVYGTKLTLGLIESKLKEAGLLGETKR ILINADSELELGEIRTTFFKTNHSIPDSVGVCLETPEGTVVHTGDFKFDFTPVNDQFADL QRIAEIGKRGVLALLSDSTNAERPGMTPSESNVGVELTEIFRKSPQRVVVATFASNVHRI QQVFNAAMATKRKVAIVGRSMVNVVTIAVELGYLIVPEGMIIEPEEVNKMAADRVVVLCT GSQGEPMSALTRMARSTHRKIDILPGDTVIIAATPIPGNEKDVGRTVDELFRLGANVIYG PGSVSGVHVSGHGSQEELKLMLNLIKPKYFIPIHGEYRMLRQHAKLGEAVGVEPNNIFLI DIGDTVEFQNGEGRKGSKVPSGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQ DGTIKAGPDIISRGFVYVRESEGLLDEANRIVTTTLNKLMNDKVNEWASLKTNVKDALGR FLYEQTRRRPMILPIIMEV NT seq 1680 nt NT seq  +upstreamnt  +downstreamnt ttgtcaaaaaagaatacccaggacaagctgctcatcttcgccctcggcggcgttggcgag atcggcaagaatatgtatgtcatccaatacggcaatgacatcgtagtcgttgactcaggc ctcaagttcccggaagaggacatgctcggaatcgacatcgtcatcccggacatcacgtat ctcaccgataaccgcgacaaagtccgcggcatcgtcatcacccacggacacgaagaccac atcggcggccttccgtacgtgctccgccatctgaacgttccggtatatggaacgaagctg acgctcggcctgatcgagagcaagctgaaggaagcgggcctgcttggagagacgaagcgg attctcatcaatgccgactccgagcttgagctcggcgagatccgcacgacgttcttcaag acgaaccacagcattccggattcggtcggcgtatgcctcgagacgccggaaggcactgtc gtccatacgggcgacttcaagttcgacttcacgccggtcaacgaccagttcgccgacctg cagcgcatcgccgagatcggcaagcgcggcgtgctcgctctgctgtcggacagcacgaac gcggagcgtccgggcatgaccccttcggagagcaacgtcggcgtggagctgacggaaatt ttccggaagtccccgcagcgcgtcgtcgtcgccaccttcgcctccaacgtgcaccggatc cagcaggtgttcaacgccgcgatggctacgaagcgcaaggtcgccatcgtcggccgcagc atggtcaacgtcgtgacgattgccgttgagctcggatacctgatcgtgcctgaaggcatg atcatcgaacccgaagaagtgaacaagatggcggcagaccgcgtcgtcgtcctctgcaca ggcagccaaggcgagccgatgtcggctctgacccgcatggcgcgctcgacgcatcgcaag atcgacattttgccgggcgacacggtcatcatcgcggcgacgccgattccgggcaatgag aaggatgttggccgtacggtggacgagctgttccgtcttggcgccaacgtcatctacgga ccgggctccgtatccggcgtccacgtatccggccacggcagccaggaagagctgaagctg atgctcaacctgatcaagccaaagtacttcattccgatccacggcgagtaccggatgctg cgccagcacgccaagcttggcgaagctgtcggcgtcgagccgaacaacatcttcctgatc gatatcggcgacacggtcgagttccagaacggcgaaggccgcaagggctccaaagttcct tccggcaacgtgctcatcgacggcctgggagtcggcgacgtaggcaacatcgttctgcgc gaccgcaagctgctgtcccaagacggcattctcgttgtcgtcgtcacgctgagcaagcag gacggcacgatcaaggccggcccggacatcatttcccgcggtttcgtctatgtccgtgaa tccgaaggcttgctggacgaggcgaaccggatcgtaacgacgaccctcaacaagctgatg aacgacaaggtcaacgaatgggcctcgctcaagacgaacgtcaaggatgcccttggccgt ttcctctacgagcagacgcgccgccgtccgatgattcttccgatcatcatggaagtttaa

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