Paenibacillus sp. RUD330: CIC07_05880
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Entry
CIC07_05880 CDS
T11330
Symbol
codY
Name
(GenBank) GTP-sensing pleiotropic transcriptional regulator CodY
KO
K03706
transcriptional pleiotropic repressor
Organism
prud Paenibacillus sp. RUD330
Brite
KEGG Orthology (KO) [BR:
prud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prud03000
]
CIC07_05880 (codY)
Transcription factors [BR:
prud03000
]
Prokaryotic type
Helix-turn-helix
Other families
CIC07_05880 (codY)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CodY
HTH_CodY
HTH_Crp_2
HTH_11
MarR_2
HTH_24
GntR
TrmB
HTH_5
HTH_20
Rrf2
MarR
HTH_41
GAF
Ribosomal_S25
WHD_RecQ_mid_bact
Y_phosphatase3
DUF7343
HTH_46
HTH_ParB
DUF1908
Diacid_rec
HTH_27
HTH_IclR
SoFic-like_C
DnaD_N
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ASS65723
LinkDB
All DBs
Position
complement(3117823..3118596)
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AA seq
257 aa
AA seq
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MTLLTKTRSLNRLLQKAAGKALSFREMAEVLSSVIQANIFVVSRRGKILGCAAVDRFDHD
QFRSLAAEAELRFPQETNSRFLQMREPETNVVPDPGIGDVFRFMNAQEMMCVVPITGGGD
RLGTVVLTRLNGVFDDEDLILAEYGSTIVGMEILRERAEEIALEARSRAVVAVAIGSLSF
SELEAVEHIFEELEGKEGLLVASKIADRVGITRSVIVNALRKLESAGVIETRSLGMKGTY
IRILNHQLLEELGKMKK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgacattattgaccaaaacaagatcgctgaaccggctgctgcaaaaagcggccggcaag
gcactcagcttcagggagatggcggaagttctcagctccgtcattcaagccaacattttc
gtcgtcagccgcagaggcaaaattttgggctgcgccgcagtcgaccgtttcgaccatgac
cagttccggagtctggctgccgaagccgagctgcgttttcctcaggagacgaacagccgc
ttcctgcagatgagggagccggagaccaacgtcgttcccgatcccggcatcggagatgta
ttccgcttcatgaacgcccaggagatgatgtgcgtcgttccgatcaccggcggcggggac
cggctcggcactgtcgtcctgacgcgtctgaacggagtattcgacgatgaggatctcatc
ctcgccgaatacgggtccacgatcgtaggcatggaaatcctgcgggagagggcggaggaa
atcgcgcttgaggcgcgcagcagagctgtcgtcgccgttgcgatcggctcgctttccttc
agcgagctggaagctgtcgagcatattttcgaggagctggaaggcaaggaaggactgctc
gttgcgtcgaagatcgccgaccgggtcggtataactagatccgtcatagtgaacgcgctc
cgcaaactcgagagcgctggagttatcgaaacgcgatctttgggaatgaaaggcacctac
atccgcatcctgaatcatcaacttttggaagaattaggcaagatgaagaaataa
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