Paenibacillus sp. RUD330: CIC07_05980
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Entry
CIC07_05980 CDS
T11330
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
prud Paenibacillus sp. RUD330
Pathway
prud02024
Quorum sensing
prud03060
Protein export
prud03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
prud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CIC07_05980 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CIC07_05980 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CIC07_05980 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
prud02044
]
CIC07_05980 (ffh)
Enzymes [BR:
prud01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CIC07_05980 (ffh)
Secretion system [BR:
prud02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CIC07_05980 (ffh)
Eukaryotic Sec-SRP protein
CIC07_05980 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
cobW
AAA_31
CbiA
APS_kinase
AAA_22
ArsA_ATPase
AAA_30
AAA_17
ParA
AAA_33
6PF2K
MMR_HSR1
AAA_18
TsaE
Motif
Other DBs
NCBI-ProteinID:
ASS65742
LinkDB
All DBs
Position
complement(3138049..3139425)
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AA seq
458 aa
AA seq
DB search
MAFEGLSSRLQNVFGKLRGKGKVTEDDVNEAMREVRLALLEADVNFKVVKEFIAKVKERA
LGQELQKSFTPGMVIIDIVNKELTELMGGTQSKLAKANRPPTVIMMAGLQGAGKTTTSGK
LALMLKKSNHKPLLVAGDIYRPAAIKQLQVVGGGIGVPVFSLGDQTSPVEIARQGVEHAK
ENGLDYVIIDTAGRLHIDEALMDELKQIHEVTKPDEVLLVVDAMTGQEAVNVAQSFHDQL
ALTGVVLTKLDGDTRGGAALSVKAVTGCPIKFAATGEKIEPLEPFHPERMASRILGMGDM
LSLIEKAQSSIDADKAAEMERKMRNAEFTFEDFLEQMEQVRSMGPLDQIMDMLPGMNKMK
GMKDLKVDDKQVGRVEAIVKSMTIEEKRKPELLNHSRRKRIAAGSGTSVAEVNRLIKQFD
DMRKMMKQFSSMMGPKGPKGGMKGLKGLLGKNMKFPFG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaagggttgtctagccggctgcagaacgtattcggcaagctgcggggcaaa
ggcaaggtaacggaagacgatgtgaacgaagccatgcgcgaggtcagactcgcactgctg
gaagccgacgtcaacttcaaggtcgtcaaggaattcatcgccaaggtgaaggagcgcgcc
ctcggccaggagctgcagaagagcttcacgccgggcatggtcatcatcgacatcgtcaac
aaggaattgacggagctgatgggcggcacgcagagcaagctcgccaaggcgaaccgtcct
ccgacggtcatcatgatggcgggcctgcaaggcgccggcaagacgacgacttccggcaag
ctcgccctgatgctgaagaaatccaaccacaagccgctgctcgtggcgggcgacatctat
cgcccggcggcgatcaagcagctgcaggtcgtgggcggaggcatcggcgtgccggtgttc
agtctcggcgaccagacttctccggtcgagatcgcccgccagggcgtcgagcatgccaag
gagaacggcctggattatgtcatcatcgatacggccggccgccttcatattgacgaagcg
ctcatggacgagctgaagcagatccatgaggtgacgaagcccgatgaagtgcttctggtc
gtggatgcgatgaccggccaggaagcggtcaacgtcgcccagagcttccatgaccagctc
gcgctcaccggcgtcgtgctgacgaagctcgacggcgatacccgcggcggcgcggccctc
tcggtcaaggccgtcacgggctgtccgatcaagttcgccgcgaccggcgagaagatcgag
ccgctggagccgttccatccggaacggatggcttcccggattctcggcatgggcgacatg
ctctccctcatcgagaaggctcagtcgagcatcgacgccgacaaggctgccgagatggag
cgcaagatgcgcaacgccgagttcaccttcgaggatttcctggagcagatggagcaggtc
cgcagcatgggcccgctggatcagatcatggatatgctgcccggcatgaacaagatgaag
ggcatgaaggatctcaaagtggacgacaagcaggtcggccgtgtcgaagcgatcgtgaag
tcgatgacgatagaagagaagcgcaagcccgagcttctcaaccacagccgccgcaagcgg
atcgccgcaggcagcggcacctcggtggcggaagtcaaccggctgatcaagcagttcgac
gacatgcgcaagatgatgaagcaattctcctccatgatgggtccgaaaggtcccaaaggc
ggcatgaaaggcctcaaaggcttgctcggcaaaaacatgaagttcccgttcggctga
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