Paenibacillus sp. RUD330: CIC07_12015
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Entry
CIC07_12015 CDS
T11330
Name
(GenBank) TrmB family transcriptional regulator
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
prud Paenibacillus sp. RUD330
Brite
KEGG Orthology (KO) [BR:
prud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prud03000
]
CIC07_12015
Transcription factors [BR:
prud03000
]
Prokaryotic type
Helix-turn-helix
Other families
CIC07_12015
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Paralog
GFIT
Motif
Pfam:
TrmB
HTH_24
HTH_11
Rrf2
TrmB_EBD_N
GntR
HTH_IclR
MarR
HTH_36
DnaD_N
WHD_RecQ_mid_bact
MarR_2
4HPAD_g_N
DUF3022
DUF603
Motif
Other DBs
NCBI-ProteinID:
ASS66806
LinkDB
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Position
4400755..4401546
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AA seq
263 aa
AA seq
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MIDRLKRLGMSELEARCYLALHEEPVLSGYEVAKRVSVSRTNVYAALRSLVEKGICRVSE
GETSMYAAIPIEDVIRQLRSEFEENAGILERDLKPQPPAPGFYSWTGEGNMRTAIRRLIA
GASRTIVVDIWSEDFPVLEPMLAEAESRGKTVIVITIGKAESGLKHVFTHKRMEMWLPGT
SRGFYILCDWKDGLLGSFNEPGKPSALETDHPSVSGMLLQAFHHDLLMMDMERDFGPQLA
EAYGSDYEKLLDRYRHDYGWDIP
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcgactcaagaggctcggcatgtccgagctggaagcccgctgttatctggcg
ctgcatgaagagcctgtcctgtccggctacgaagtcgccaagagagtgtccgtctcgcgc
acgaatgtctatgcggctctgaggtcgctcgtagagaagggaatctgccgggtatcggag
ggcgaaacatccatgtacgctgcgattcctatcgaggatgtcatccgccagctgcgttcg
gagttcgaggagaatgccggcattctggagcgcgatttgaagccccagccgcctgccccg
ggcttctacagctggacgggcgaaggcaatatgcggacggcgatccgccggctgatcgcc
ggggcgagccgcaccatcgtcgtcgatatttggagcgaggacttcccggtattggagcct
atgctggctgaagccgaaagccgaggcaagacggtgatcgtgattacgatcggcaaggcg
gagagcgggctgaagcatgtcttcacccataagcggatggaaatgtggctgccgggcaca
tcccgaggcttctacatcctctgcgactggaaggacggtctgctcggcagcttcaacgag
cccggcaagccgtccgccctggagacggatcatccgtccgtatccggcatgctcctgcag
gcgttccatcacgaccttctgatgatggacatggagcgcgacttcggtccccagctggcc
gaagcctacggctccgactatgagaagctgcttgaccgctaccgccatgattatggctgg
gatattccttga
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