Paenibacillus sp. RUD330: CIC07_19300
Help
Entry
CIC07_19300 CDS
T11330
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
prud Paenibacillus sp. RUD330
Pathway
prud03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
prud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CIC07_19300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prud03400
]
CIC07_19300
DNA repair and recombination proteins [BR:
prud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CIC07_19300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
SLX1_C
DUF8090
DUF7837
Motif
Other DBs
NCBI-ProteinID:
ASS68037
LinkDB
All DBs
Position
527257..528210
Genome browser
AA seq
317 aa
AA seq
DB search
MQTIWKGAVGFGLVNVPVRLYAATEDNDIPMRMLHKKYNQPIKYHRTCPKCEEDVSWSDI
VKGYEYEDGRFVTFEKDELEQLASKTSREIRILDFVDLEEIDPIYFQKTYYLSPEETGKH
AYRLLVEALKSTRKIGVANVTIRQKSSLAAIRVVDGVLSLVTMFYEDEIREKNHIPGLPE
EEKVDRRELDMAKSLIEQLTGSFEPEKYKDEYRERLLEAIEGKVEGKEVKVAEEEAEPNV
LDLMDALQKSLKQLKPAGGTDSGNADKPRRGAASKAKPKSSKAGSSASKPKPSESKAKPA
AAKPKRRSGTRSKETGS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgatctggaagggagcggtcggcttcggcctcgtcaacgttccggtgcggcta
tatgcggctaccgaggacaacgacatcccgatgcggatgctccacaagaaatacaaccag
ccgatcaagtaccaccgtacctgtcccaaatgcgaggaggacgtttcctggagcgacatc
gtcaaaggctacgagtatgaggatggccgcttcgtcaccttcgagaaggacgagctggag
cagctggcttcgaaaacctcgcgcgagatccgtatcctcgattttgtggatttggaggaa
atagatcccatctattttcaaaagacctactatctctctccggaggaaaccggcaagcac
gcctatcggctgctcgtcgaggcgctgaaaagcacccggaaaatcggcgtcgccaatgtg
acgatacggcagaagagcagccttgcggctatccgcgtcgtggacggagtgctttccctc
gtcacgatgttttatgaggatgagatccgcgagaaaaaccatattccgggcctgcccgag
gaagagaaggtcgaccggcgggagctggacatggcgaagtcgctgatcgagcagctgacg
ggaagcttcgagccggagaaatacaaggacgagtaccgggaaaggctgctggaggcgatc
gagggcaaggtggaaggcaaggaggtcaaggtcgccgaagaggaggcggagccgaacgtg
ctggacttgatggacgcgctgcagaagagtctcaagcagctgaagcctgcaggcggcacg
gattccggaaatgcggacaagccgcgcaggggggcagcctccaaagccaagccgaaatca
tccaaggccgggtcctccgcttccaaaccaaagccgtcggaatccaaggcgaagccggct
gccgccaagccgaagcgccgttcgggaacccggtcgaaagaaacgggatcataa
DBGET
integrated database retrieval system
