Paenibacillus sp. RUD330: CIC07_19695
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Entry
CIC07_19695 CDS
T11330
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
prud Paenibacillus sp. RUD330
Pathway
prud03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
prud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIC07_19695 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prud03400
]
CIC07_19695 (uvrB)
DNA repair and recombination proteins [BR:
prud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIC07_19695 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CIC07_19695 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UvrD-helicase
AAA_22
AAA_16
AAA_7
AAA_30
AAA_19
Kinesin
AAA_5
AAA_25
HEM4
nSTAND_NTPase5
DUF87
Motif
Other DBs
NCBI-ProteinID:
ASS68107
LinkDB
All DBs
Position
618338..620332
Genome browser
AA seq
664 aa
AA seq
DB search
MADTVQKLFNLKSDYTPQGDQPGAIQKLVEGVREGQKHQILLGATGTGKTYTIANTIARL
NRPTLVIAHNKTLAAQLCSEFQEFFPDNAVSYFVSYYDYYQPEAYLPSTDTYIEKDSSIN
DEIDKLRHSATSSLFERRDVIIVASVSCIYGLGSPSEYGSLVLSLRKGMEKGRDQILHKL
VDIQYQRNDINFVRGTFRVRGDIVEIFPVANNERAIRVELFGDEIERITEIDVLTGEIIG
EREHVAIFPASHFVTHEDKMKIALVNIERELEERLADLRERGKLLEAQRLEQRTRYDIEM
MQEMGFCSGIENYSGPLTFRERGATPYTLMDYFPDDMLIVIDESHVTLPQIRAMYNGDRA
RKEVLVEHGFRLPSAMDNRPLRFEEFEAKDKQTIYVSATPGPYELETAPGEPIQQIIRPT
GLLDPIIEVRPTKGQIDDLLGEIRDRIAKDERVLVTTLTKKMSEDLTDYLKEVGIKVRYL
HSDIKTLERMAILRDLRVGTFHVLVGINLLREGLDLPEVSLVTILDADKEGFLRSERSLI
QTIGRAARNSEGRVIMYGDKITDSMKLAISETQRRRSIQEAYNEKHGVTPTTIRKRIHDV
IEATKAAEQKADYLSGVSGKLTKKERQQVINRLEAEMKNAAKNLNFEKAAELRDALLELR
AEDS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggccgataccgtacagaaacttttcaacctgaagtcggactatacgcctcagggcgac
cagcccggcgcgatccagaagctcgtcgaaggggtgcgggagggacagaagcaccagatc
ctgctcggcgccaccggcacgggcaagacctacacgatcgccaacaccattgccaggctc
aaccgcccgacgctcgtgatcgcccacaacaagacgctcgccgcccagctgtgcagcgag
ttccaggagttcttccccgacaacgccgtctcctacttcgtcagctactatgactattac
cagcctgaagcctacctcccgtcgaccgacacctacatcgagaaggattccagcatcaac
gacgagatcgacaagctgcgccactccgcgaccagctcgctgttcgagcgccgcgacgtc
atcatcgtcgccagcgtgtcgtgcatctacggcctcggctcgccttcggagtacggaagc
ctcgtgctttctttgcgcaagggtatggagaagggacgcgaccagatcctgcacaagctc
gtcgacatccaataccagcgcaacgacatcaacttcgtgcgcggcacgttccgggtgcgg
ggagacatcgtcgagatcttcccggtcgcgaacaacgagcgggccatccgcgtcgagctg
ttcggagacgagatcgagcgcatcaccgagatcgacgtcctgacgggcgagatcatcgga
gagcgcgagcatgtggcgatcttcccggcctcccactttgtcacccacgaggacaagatg
aagatcgcgcttgtcaacatcgagcgcgagctggaggagcgtctggccgatctgcgcgag
cggggcaagctgctggaggcgcagcggctggagcagcggacccgctacgacatcgagatg
atgcaggaaatgggcttctgctccggcatcgagaactactccggaccgctgaccttccgc
gagcggggggcgactccgtatacgctgatggactatttcccggacgacatgctgatcgtc
atcgacgagtcccatgtgacgctgccgcagatccgcgccatgtacaacggagaccgcgcg
cggaaggaagtgctcgtggaacacggcttccggctgccgtccgccatggacaaccggccg
ctgcgcttcgaggagttcgaggccaaggacaagcagacgatctatgtgtccgcgacgccg
ggcccttacgagctggagaccgctccgggtgagcccatccagcagatcatccgcccgacg
ggcctgctggatcccatcatcgaggtccgtccgacgaaggggcagatcgacgatctgctc
ggcgagatccgcgaccgcatcgccaaggacgagcgcgtgctcgtcacgacgctgaccaag
aagatgtcggaggacctcaccgactacctcaaggaggtcggcatcaaggtccgctacctg
cactccgacatcaagacgctggagcggatggcgatcctgcgcgatctgcgcgtcggcacc
ttccacgtgctcgtcggcatcaacctgctgcgggaaggcctcgacctaccggaagtgtcg
ctggtgacgattctcgatgcggacaaggaaggcttcctccgctccgagcggtcgctcatc
cagacgatcggacgggcggcgcgcaactccgagggccgggtcatcatgtacggcgacaag
atcaccgattccatgaagctcgcgatctcggagactcagcgccggcgctccatccaggaa
gcgtacaacgagaagcacggcgtgacgccgacgacgatccgcaagcggatccacgacgtc
atcgaggcgacgaaggcggccgagcagaaggccgactatctgtccggcgtctccggcaag
ctcaccaagaaggagcgccagcaggtgatcaaccgcctggaggcggagatgaagaacgcc
gccaagaacctcaacttcgaaaaggcggcggagctgcgcgacgcgcttctcgagctgcgg
gccgaagacagctga
DBGET
integrated database retrieval system
