Paenibacillus sp. RUD330: CIC07_23385
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Entry
CIC07_23385 CDS
T11330
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
prud Paenibacillus sp. RUD330
Pathway
prud03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
prud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CIC07_23385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prud03400
]
CIC07_23385
DNA repair and recombination proteins [BR:
prud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CIC07_23385
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
ASS69466
LinkDB
All DBs
Position
complement(1479104..1480036)
Genome browser
AA seq
310 aa
AA seq
DB search
MHTVWKGAISFGLVHVPVKMFSATEDKDISLRMLHSVCGSPIAYVKECPVCDRRIETNEI
VKGYEYEKGRFVTFEKEELDQLGGEKSKTIQIIDFVALEEIDPIYFQKTYYLSPDQAGGG
AYSLLMEAMKESGKIGIAKISIRSKSSLAAIRVLDGCLAIETIFYPDEIRPIQQVPNLPG
AVALNDKELSMAKLLIDQLTTPFEPEKYTDDYRSAMHDLIQGKIAGEEVRIAPQQEPAHV
LDLMAALQASLESVKGPAAAPVLDTGAADKPKKKGAKTPAAGLADSGEADKPAKKPAKPR
AKKTKESGAS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgtatggaagggcgcgatcagcttcggactggtgcatgtgcccgtcaagatg
ttctccgccacagaggacaaggacatctcgctgcgcatgctgcattccgtctgcggcagt
cccatcgcttatgtgaaggaatgccccgtatgcgacaggcggatcgaaacgaatgaaatc
gtcaaaggttacgaatacgagaagggccgctttgtcacctttgaaaaggaagagttggac
cagctcggcggagagaagtccaaaacgattcagatcatcgattttgtcgccctggaggag
atcgatccgatctatttccagaaaacctattacctctcgcccgatcaggcggggggagga
gcctactcgctgctgatggaagcgatgaaggaatccggcaagatcggcatcgccaaaatt
tccatccgctccaagtcaagcctcgccgcgatccgcgtgctcgacggctgcctcgcgatc
gagacgatcttctatcccgatgaaattcggccgatccagcaggttccgaacctgcccgga
gcggtagcgctgaatgacaaggagctgtcgatggccaagctcctcatcgatcagttgacg
acgccgttcgagcccgaaaaatacaccgacgattaccggagcgccatgcatgatctgatc
caaggcaagatcgccggcgaggaagtccgcatcgcgccgcagcaggagcccgcacatgtg
ctggatctgatggccgccctgcaggcaagcctggaatcggtgaaaggtcctgccgcagcc
cccgtgctcgataccggtgccgcggacaagcccaagaagaaaggcgcgaaaacgccggca
gccggcctagcggactccggagaagccgacaagcccgcgaagaaacccgccaagccgcgc
gccaagaaaaccaaggaatccggcgcttcctga
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