Paenibacillus sp. RUD330: CIC07_25050
Help
Entry
CIC07_25050 CDS
T11330
Name
(GenBank) LacI family transcriptional regulator
KO
K12113
LacI family transcriptional regulator, ebg operon repressor
Organism
prud Paenibacillus sp. RUD330
Brite
KEGG Orthology (KO) [BR:
prud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prud03000
]
CIC07_25050
Transcription factors [BR:
prud03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CIC07_25050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_AraC
HTH_24
HTH_40
HTH_23
HTH_Crp_2
HTH_Tnp_ISL3
HTH_38
Crp
Sigma54_DBD
Phage_terminase
HTH_3
HTH_IclR
Sigma70_r4
DUF6886
MarR
Motif
Other DBs
NCBI-ProteinID:
ASS69026
LinkDB
All DBs
Position
1849643..1850671
Genome browser
AA seq
342 aa
AA seq
DB search
MAKLKDIADRVGVSISTVSRVMKNDSNRSVSEETRKKIWEAAEQVGYRSLRQNKTKKSEL
KYAYNIGCVVAMPQNKYNSPYFSIILEGIEKTLAGLGMRLEFVYSIEEQSGIDELKRLVK
DNRIDGMLVVERIHQEAYEWLKGNVKTIVGIDLSDPEVPVVSYDRAAAAKEAVRYLIGQG
HRRIAYIGGPELDGDFREEKRFLGYRDAMIEAGLAIEDEWVINVKWDVALSYELTKEAFE
NNGNSPTAIFAASDMMAIAAMRAATERGLRIPEDISFFGVDNISISEFTSPPLSTIYVPK
LEMGMFAVKLLVEYAENQHSVPVRIVIPHKCLLRQSSNNKLG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactaaaggatattgcggaccgggtaggcgtatctatttcgaccgtatcccgg
gtgatgaaaaacgactcgaaccgatcggtgagcgaagagacccgcaaaaagatctgggaa
gcggcggagcaggtcggataccgctccttgcgccagaacaaaaccaagaaatccgaattg
aaatacgcctacaatatcggctgtgtcgtggccatgccgcagaacaaatacaacagcccc
tatttctccatcattctggaaggcatcgagaagacgctcgccggactgggcatgcgcctg
gagttcgtctacagcatcgaggagcagtccggaatcgacgagctcaagcgtctggtgaag
gacaaccggatcgacggcatgcttgtcgtggagcgcatccatcaggaggcttacgagtgg
ctgaaggggaacgtgaaaacgatcgtcggaatcgatctgtcggatcccgaagttccggta
gtcagctatgaccgggcggcagcggccaaggaggcggtccgttatctgatcggacagggc
catcgccggatcgcctacatcggaggtccggagcttgacggcgattttcgcgaggagaag
cgtttcctcggctatcgcgatgcgatgatcgaggccggcctggcaatcgaggatgaatgg
gtcatcaatgtgaagtgggatgtcgccttgagctacgagctgacaaaagaagctttcgag
aacaatggcaattccccgaccgccatttttgcggccagcgatatgatggcgattgccgcc
atgagggcggcgacggaacggggcctccggattccggaggatatctcttttttcggcgtg
gacaacatcagcatctcggagttcacgtctccgccgctgtccaccatctatgtccccaag
ctggagatgggcatgttcgccgtcaagctgctggtcgaatacgcggagaatcagcactcc
gtgccggtccggatcgttattccgcataaatgcctgctcaggcagtcgtccaacaacaag
ctgggctag
DBGET
integrated database retrieval system
