Pendulispora rubella: LVJ94_04925
Help
Entry
LVJ94_04925 CDS
T10973
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
prue Pendulispora rubella
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prue01011
]
LVJ94_04925
Enzymes [BR:
prue01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LVJ94_04925
Peptidoglycan biosynthesis and degradation proteins [BR:
prue01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LVJ94_04925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
SLT_2
Motif
Other DBs
NCBI-ProteinID:
WXB06588
UniProt:
A0ABZ2L6S8
LinkDB
All DBs
Position
1132676..1134292
Genome browser
AA seq
538 aa
AA seq
DB search
MADLKLPDFPIRWDPRVVRYLEFFKEDPRGRSMLAIWHRRSGRYRTMVSTILRRKSVPED
LFWIAMVESGFDPAARSPVGALGLWQFMPETGKQYGLAQDRWVDHRLNPQLATEAATEFL
ADLQRRFGSWELAIASYNMGYAGMLGVVRKFNTNDFWTLSRLEGALPWETTLYVPKIMAA
AIVGKNLAAFGLSEDKMEPPVEFDEVVVPPGTALSQVASAIGLPTKEIVDLNLELRAQRT
PPIDPGEKAEQKAKGAPASEGDSTGYPVKVPVGKGALLTQNMSKIKKNYVAPERYVVRFG
ETVEQIANARGVTSSKVAELNGMAPGEVVRGGTVLLVPAAKGGAVAAPTTSDKPVAIVPS
DVFVYPDRRRVFYRVVTGDTLRDVATTFHVTVDEIRRWNEIDPAGRLQEGMTLQLFVPPD
TDLSKVLSLSENQVRTIAVGTEDFFTYWEGQKGRRRITVPAKLGETIEIVGKRYGVTPAS
MERINRKNRNEVLKEGDVVVVYLPANSKKADPGAQADDPFAPEPLGALPTPPAPGSLP
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctgaagctgccggacttccccatccgctgggacccccgcgtggtgcgctac
ctggagttcttcaaggaggatccgcgcggtcggtccatgctggccatctggcaccgtcgc
tcggggcgctatcgcacgatggtgagcacgatcttgcggcgaaaatcggtgccggaggat
ttgttctggattgcgatggtggagagcggtttcgatccagccgcccgatcgcccgtcggg
gcgttggggctatggcaattcatgcccgagacgggcaagcaatatgggctcgcgcaagac
cgctgggtcgatcaccggttgaatccgcagctcgcgacggaggcggccacggagtttctc
gcggatctgcagcgccgtttcgggagctgggagctcgccatcgcctcgtacaacatgggg
tacgcggggatgctgggggtcgtgcggaagttcaacacgaacgacttctggaccttgtca
cgtctcgagggcgcgctcccttgggagacgacgctctacgtgccgaagatcatggcggcg
gccatcgtgggcaagaacctcgcggccttcgggctctccgaggacaagatggagccgccg
gtggagttcgacgaggtcgtggtgcccccgggcacggcgctttcgcaggtggcttccgcg
attgggctgccgacgaaggagatcgtggatctcaatctggaacttcgcgcgcagcgcacg
ccgccgatcgatccgggtgaaaaggccgagcaaaaagcgaagggtgcgcccgcctccgaa
ggggactccaccggctatccggtgaaggtgcccgtcggcaaaggagccttgctcacgcag
aacatgagcaagatcaagaagaactacgtggcgccggagcggtacgtggtgcgcttcggc
gagacggtcgaacaaatcgcgaacgcgcgcggggtgacgtcgtccaaggtggcggaactc
aatggcatggcaccgggcgaggtggtgcgcggagggacggtgctcctcgtgcctgcagcc
aagggtggagcggtggcggcgcccacgacgagtgacaagccggtggccatcgtgccgtcg
gacgtgttcgtctaccccgatcgaaggcgcgtgttttaccgcgtggtgacgggcgacacc
ttgcgcgacgtggcgacgaccttccacgtgacggtggacgagattcgccggtggaacgag
atcgatccggcgggtcggttgcaagaagggatgacgctgcagttgttcgtgccgccggat
accgatctgagcaaagtgctctcgctgtcggagaaccaggtgcgcaccatcgcggtcggc
accgaggatttttttacgtactgggaagggcaaaaagggcgacggcgcatcaccgtgccg
gccaagctcggggaaaccattgagattgtcggcaagcgctacggtgtgacgccggcgtcg
atggagcggatcaatcggaagaaccgcaacgaggttctcaaggaaggcgacgtcgtggtc
gtctacctgcccgcgaactcgaagaaggccgatcccggcgcccaggccgacgatccgttc
gcaccggaaccccttggggcgctgccgacgccgcctgctccaggatcgttgccttag
DBGET
integrated database retrieval system
