Pendulispora rubella: LVJ94_06095
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Entry
LVJ94_06095 CDS
T10973
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
prue Pendulispora rubella
Pathway
prue03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
prue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVJ94_06095
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LVJ94_06095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
DnaJ_CXXCXGXG
nSTAND1
AAA_29
AAA_25
AAA_16
NACHT
DUF4350
MeaB
Motif
Other DBs
NCBI-ProteinID:
WXB06803
LinkDB
All DBs
Position
complement(1463014..1465578)
Genome browser
AA seq
854 aa
AA seq
DB search
MKSTRSHTPREAPDARREGFVRVRGAREHNLQNVDVAIPRDVLVVFTGVSGSGKSSLAFG
TLYAEAQRRYLESVSPYARRLFHQMPVPDVDEIDGLPPAVALQQQRGTPTTRSSVGSVTT
LSNLLRMLYSRAGTYPARQPMLYAESFSPNTPEGACPKCHGLGRVYEVTERSMVPDDSLT
IRERAIAAWPPAWHGQNLRDILVTLGYDVDRPWRELPKKDRDWILFTEEQPTVPVYAGRT
PAETRRALKRKEEPSYQGTFSSAQRFVLHTFANTQSALVKKRVSQYLVSGDCSRCHGKRL
RAESLSVTFAGYDIAEMSRLPLRRLFALLQPYADGTARSLEALRRDHPEKGIVAQRITED
AVSRLEILLDLGLGYLTLDRGTPTLSPGELQRLRLATQVRSNLFGVVYVLDEPSAGLHPA
DTEALLRALDRLKTSGNSLFVIEHEVDVIRHADWIVDVGPAAGSKGGHVLYSGPLPGLAT
VEHSETAKAIFPKHGPTRRTPRTPQGWLRLSGVTRNNIRGLDVSFPLGVFTSVTGVSGSG
KSSLVSQVLVELVTGALGQKVEIEVAEGEAALEHPVPSAVEGRIESGMDWVKRLVVVDQK
AIGRTPRSNLATYTGLFDHVRRIFAATPAARARRYDAGRFSFNVNKGRCPNCQGEGFVMV
ELLFLASVYSACPVCNGTRYNAKTLEVKWQGKSIADVLALTVDEAAALFENEEAVRRPLT
TLQEVGLGYLRLGQPATELSGGEAQRIKLATELQRPQRGHNLYVLDEPTTGLHPTDVDRL
LRQLDGLVESGNTVIVVEHDMKVVASSDWVMDIGPGAGEEGGTVVVAAPPAQVAAAHPTQ
SCTAAYLAQYLRKA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccacgcgtagccatacccctcgcgaagcccccgatgctcggcgtgaaggcttc
gttcgcgtacggggggcgcgcgaacacaacctccagaacgtcgacgtcgcgatcccgcgt
gacgtcctcgtggtcttcacgggcgtgtcgggatcgggcaagtcgtccctcgccttcggt
accctctatgccgaagcccaaaggcgctacctcgagtcggtctcgccctatgcgcggagg
cttttccaccagatgcccgtgcccgacgtggacgagatcgacgggctgccgccggccgtg
gcgctgcagcagcaacggggcacccccaccacgcgctcgtcggtgggcagcgtcaccacc
ctctcgaatttgctccgcatgctctattcgcgcgcgggaacgtacccggcgcgccagccg
atgctgtacgccgaatccttttccccgaacacgccggagggcgcatgccccaagtgccac
gggctcgggcgcgtgtacgaagtcaccgagcgctcgatggtgcccgacgactcgctcacc
atccgtgaacgcgccatcgccgcctggccgcccgcatggcacggccagaacctgcgcgac
atcctggtcaccctggggtacgacgtcgaccgcccgtggcgcgagctaccgaagaaggat
cgcgactggatcctctttaccgaggagcagcccaccgtaccggtctatgcgggccgcacc
cccgccgagacgcgccgcgcgctgaaacgcaaggaggaaccgagctaccagggcacgttc
tcgagcgcccagcggttcgtgctccacaccttcgccaatacgcagagcgcactcgtcaag
aagagggtgtcgcaatacctggtgagtggtgactgctcgcgatgccatggcaagcgtctg
cgcgccgagtccctctcggtcacgttcgccggctacgacatcgccgagatgtcgcgattg
cccctccgccggctcttcgcgcttttgcagccgtatgccgacggaacggcacggtccctc
gaggcactgcggcgcgaccaccccgagaagggcatcgtcgcacagcggatcaccgaggac
gccgtatcgcgattggagatcctcctcgatctggggctcgggtatctcaccctcgaccgc
ggaacgccgacgctctcgccgggggagctgcagcgcctgcgccttgcgacgcaggtgcgt
tccaacctctttggcgtcgtctacgtgctcgacgaaccgtcggccggcctgcatcccgcc
gacaccgaagcgctcctgcgcgcgctcgatcggctgaagacgtcgggcaattcgctattc
gtcatcgagcacgaggtcgacgtcatccggcacgccgattggatcgtcgacgtgggaccg
gccgccgggagcaagggcgggcacgtgctgtacagcggcccgctaccgggattggccacc
gtggagcactccgagaccgcgaaggccatctttccgaagcacgggccgacgcggcggacg
cctcgcacgccgcaaggctggctacggctttccggcgtcacgcgcaacaacatccgaggg
ctcgatgtgagctttcccctcggcgtcttcacgtccgtgaccggcgtttccggttccggc
aagtcgagcctcgtcagccaggtgctcgtcgagctggtgacgggtgcacttggccaaaaa
gtggaaatcgaagttgccgagggcgaggccgcgctcgagcatccggtcccgtcggccgtc
gaaggacgcatcgaatcgggcatggactgggtgaagcgcctcgtggtggtcgaccagaag
gccatcgggcgcacgccgcgctcgaacctcgccacctacacgggccttttcgatcacgtg
cgccggatcttcgccgccacacccgccgcccgggcgcgccgctacgacgcgggtcgcttc
tcgttcaatgtcaacaagggccgctgccccaattgccagggcgagggcttcgtgatggtc
gagctcttgtttttggccagcgtctacagcgcctgccccgtctgcaatggcacacgctac
aacgccaaaacgctagaagtgaaatggcagggaaagagcatcgccgacgtcctggccctg
accgtggacgaggcggctgccctgttcgaaaacgaggaggccgtccgccgccccctcacg
accctgcaagaagtcggtctcggttacctgcgcctcggccagccggccacggaactgtca
ggtggcgaggcgcaacggatcaaactcgccaccgagctgcagcgcccgcagcgcgggcac
aacctctacgtactcgacgaaccgacgacggggctccatcccaccgacgtcgaccggctc
ctacggcaactcgacggcctcgtggagtcgggcaacaccgtgatcgtggtggagcacgat
atgaaagtcgtcgcgtcgagcgattgggtgatggacatcggaccgggcgccggcgaagag
ggcggcacggtggtcgttgccgcaccaccggcccaagtggccgcagcccacccgacgcag
agctgcacggcagcgtatctggcgcaatacctgcgcaaggcgtag
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