Pendulispora rubella: LVJ94_08080
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Entry
LVJ94_08080 CDS
T10973
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
prue Pendulispora rubella
Pathway
prue00260
Glycine, serine and threonine metabolism
prue00630
Glyoxylate and dicarboxylate metabolism
prue00670
One carbon pool by folate
prue00785
Lipoic acid metabolism
prue01100
Metabolic pathways
prue01110
Biosynthesis of secondary metabolites
prue01200
Carbon metabolism
Module
prue_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LVJ94_08080 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LVJ94_08080 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LVJ94_08080 (gcvP)
00670 One carbon pool by folate
LVJ94_08080 (gcvP)
Enzymes [BR:
prue01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LVJ94_08080 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WXB07192
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Position
2064382..2067249
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AA seq
955 aa
AA seq
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MSQPWKHPDRFVLRHVGPDAAEIAEMLRALRLSSLEELVDETVPTSIRLARPLDLPAPLA
ESELAAQANELSQRNEIFRSYLGMGYSDCVTPRVIQRNILENPGWYTQYTPYQAEIAQGR
LEALLNYQTMVSDLTGLPIANASLLDEATAAAESMHMAHALQSGEEKNVFFASEACHPQT
LDVLRTRAEAIGIKLVIGDHASVDFASLGAFGALVQYPATDGALYDYRAFGEKVHAAGGL
FIVAADILSLALLTPPGEFGADVAIGSTQRFGVPLGYGGPHAAYLATKNEFVRKLPGRII
GVAQDSRGKPALRMALQTREQHIRREKATSNICTAQALLAVIAGMYAVYHGPRGIRAIAE
MVHTATNSLAGGLRALGVRLVHDAWFDTLRVRGSEADVKKWLAAAESRRINLRRIDAENL
GISLDETTTPADVASLLGIFGGDGNTGATLASPITGVLQRSSAYLTHAIFNKYHSETEML
RYMRLLEGRDLSLTHSMIPLGSCTMKLNATAEMMPITLPGFNRLHPYVPFAQSRGYQQIF
DELESFLAEMTGFSAVSLQPNAGAQGEYAGLLAIRKYHESRGDAHRTVCIIPSSAHGTNP
ASAVMAGLDVVVVKCDEQGNINVADLEEKAQKHRDKLGALMVTYPSTHGVFEEQIKKICS
VIHENGGQVYMDGANLNAQLGLCRPGDIGADVCHVNLHKTFCIPHGGGGPGMGPIAVASH
LAPFLPHYPTPVAKNERLSSEFGVGPVSAAPWGSASILIISWAYIKMMGAEGLTHATKVA
ILNANYIAERLGPHFPIVYRGTRGRVAHECILDVRPFKKTAGIEVDDVAKRLMDYGFHAP
TMSFPIAGTLMVEPTESESKAELDRFCDAMISIREEIRQIEEGRLSREDNPLKNAPHTAD
MVIANEWKHAYGRELGAFPAPSTRERKFWPPVGRLNNALGDRNLICTCPPLEDYE
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaccctggaaacaccccgatcgattcgttttgcgccatgtcggccccgacgcc
gccgagatcgccgagatgcttcgcgctctccggctttcgtcgctcgaagagctcgtcgac
gagacggtgcctacgagcattcgcctcgcccgcccgctcgatcttcccgcgcccctcgcc
gaaagcgagttggccgcgcaggcgaacgagctcagtcagcggaacgagattttccgctcg
tacctgggtatgggttactcggactgtgtgacgccccgagtcatccagcgaaacatcctg
gagaatcccggctggtacacgcagtacacgccctaccaggccgagattgcgcagggccgc
ctcgaggcgctgctcaattaccagacgatggtgagcgacctcacggggctgcccatcgcc
aacgcgtcgctgctcgacgaggccaccgccgccgccgagtcgatgcacatggcccacgcg
ctgcagagcggcgaggagaagaacgtgttcttcgcctcggaagcgtgccacccgcagacg
ctcgatgtgctgcgcacgcgcgcggaggccatcggcatcaagctggtcatcggcgatcac
gcgagtgtggacttcgcgtcgctcggggcgttcggcgccctcgtgcagtacccggcgacc
gacggcgcgctctacgactaccgcgccttcggcgagaaggtgcatgcggcgggcggcctg
ttcatcgtcgcggcggacatcctgtcgctggcgcttctcaccccgcccggtgagttcggc
gcggacgtggcgatcggcagcacgcagcgcttcggcgttccgctcggctacggcggaccg
cacgcggcctacttggccacgaagaacgagttcgtgcgcaagctgccgggccgcatcatc
ggcgtcgcccaggattcgcgcggcaagcctgcattgcgcatggcgctgcagacgcgcgag
cagcacattcgccgcgagaaggcgacgagcaacatctgcaccgcgcaggcgctcctcgcg
gtcatcgccggcatgtacgccgtctaccacggcccgcgcggcatccgcgccatcgccgag
atggtgcacacggcgacgaactcgctggccggcggcctgcgcgccctcggcgtgcgcctc
gtgcacgacgcgtggttcgataccttgcgcgtgcgcggctcggaagcggacgtgaagaag
tggctcgccgccgcggaatcacgccgcatcaacctgcgccgcatcgacgcggagaacctc
ggcatcagcctggacgagaccacgacccccgcggacgtggcgtcgttgctcggcatcttc
ggcggcgacggaaacaccggcgcgacgttggcctcgcccatcacgggcgtgctgcaacga
agctcggcgtacctcacgcacgcgatcttcaacaagtaccactccgagacggagatgctg
cgctacatgcgcctgctcgagggccgcgacctgtcgctcacgcactcgatgatcccgctc
ggctcgtgcacgatgaagctcaacgcgacggcggagatgatgcccatcacgctgcccggc
ttcaaccgattgcacccgtacgttccgttcgcgcagtcgcgcggctaccagcagatcttc
gacgagctggaaagcttcctcgccgagatgaccggcttctccgcggtcagcctgcagccc
aacgcgggcgcgcagggcgagtacgcgggccttctcgcgatccgcaaataccacgagagc
cgcggcgatgcgcatcgcacggtgtgcatcatcccgtcgtccgcgcacggcacgaacccg
gcctccgccgtcatggcggggctcgacgtcgtcgtggtcaagtgcgacgagcagggcaac
atcaacgtggccgatctcgaggagaaggcccagaagcaccgcgacaagctcggggcgctg
atggtcacctatccctcgacccacggcgtattcgaggagcagatcaagaagatctgctca
gtcattcacgagaacggcggccaggtttacatggatggcgccaaccttaatgcgcagctt
ggcctgtgccgccccggcgacatcggcgccgacgtgtgccacgtcaacctgcacaagacg
ttctgcatcccgcacggcggcggcgggcccggcatgggccccattgcggtggcctcgcac
ctcgctccgtttttgccgcactacccgacgcccgtcgcgaagaacgagcgcctctccagc
gaattcggtgtggggcccgtgtccgcggcgccgtggggaagcgcgagcatcctgattatc
agctgggcgtacatcaagatgatgggcgccgagggcctcacccacgcgaccaaggtcgcc
atcttgaacgcgaactacatcgccgagcgcctcggcccgcacttccccatcgtgtaccgc
ggcacgcgcggacgcgtcgcgcacgagtgcatcctcgacgttcgccccttcaagaagacg
gcgggcatcgaggtcgacgacgtggccaagcgcctcatggactacgggttccacgcgccg
accatgtcgttccccatcgcgggcaccctcatggtggagccgacggagagcgagtccaag
gccgagttggaccgcttctgcgacgcgatgatctccatccgcgaagagatccgccagatc
gaagaaggccgcctctcgcgcgaggacaacccactgaagaacgcgccgcacaccgcggac
atggtcatcgccaacgagtggaagcacgcctacggccgcgagctcggtgcattccccgcg
ccgtcgacccgcgagcgcaaattctggccgcccgtgggccggctgaacaatgcgctcggc
gatcgcaatctgatctgcacctgcccgccgctcgaagattacgagtga
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