Pendulispora rubella: LVJ94_11640
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Entry
LVJ94_11640 CDS
T10973
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
prue Pendulispora rubella
Pathway
prue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVJ94_11640 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prue03019
]
LVJ94_11640 (pnp)
03016 Transfer RNA biogenesis [BR:
prue03016
]
LVJ94_11640 (pnp)
Enzymes [BR:
prue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LVJ94_11640 (pnp)
Messenger RNA biogenesis [BR:
prue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LVJ94_11640 (pnp)
Transfer RNA biogenesis [BR:
prue03016
]
Prokaryotic type
tRNA degradation factors
LVJ94_11640 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
PCB_OB
KH-I_KHDC4-BBP
Peptidase_M20
OB_RRP5_4th
KH_2
Motif
Other DBs
NCBI-ProteinID:
WXB07882
UniProt:
A0ABZ2LAD4
LinkDB
All DBs
Position
complement(2892397..2894655)
Genome browser
AA seq
752 aa
AA seq
DB search
MSFVRESVIVNGRPLTIETGRLAKQAHGAVLLSYGESVVLVTAVSGDERPGLDFFPLTCE
YVEKTFAAGKIPGGFFKREGRQRDDEILTSRLIDRPCRPLFPEGFKKDTQIIATVLSSDK
INPTDVLALTGASAALHISDIPWAGPLAGVRVARVHGEFIAFPTFEQQSQSDIDMVVACS
KDAIVMVEGGAAEANEGDVLDALWFAHKAAQPILELIERLRAAVGKEKRVFEAVKLDAKI
AGRVKDLSDTGILESALIKEKKTRYDSYKSVKTKLTETLLAELGAETFAANEKLIKEEFE
ERKYHVVREYVLGQNKRIDGRAMDVIRPITTEVGLLPRVHGSALFQRGETQAVVTSTLGT
SADEQKIDALTGERWKRFMLHYNFPPFSTGETKPLRGPGRREVGHGALAERALARMIPEQ
EKFPYTIRVVSETLESNGSSSMAAVCGGTLSLMDAGVPIKSPVAGIAMGLIADAAPGPNQ
RTAILSDILGDEDHLGDMDFKVCGTERGITAIQMDIKIAGLSREIMSRALDQARAGRLFI
LGKMLESLTTPRTELSKYAPRITTVKVKPDQIRLIIGPGGKTIKGIIDQTGVAIDVEDDG
TVNVASSDSEAVKKALDIIKGLTAEPEVGAVYKGAVQRVTDFGAFVELLPGTDGLLHISE
MAHTRVERVTDVMKEGDVVEVKVLSIDRDGKIRLSRRELLPLPEGEEGERAKERMLAARE
SGGGPPPRRGGGGGDRGGPPRGGPRGGGDRRR
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgttcgtgaatcggtcatcgtcaacggccgtccactcaccatcgagacgggt
cgtctggccaaacaggcccacggcgccgttctcctcagctacggcgagagcgtggttctc
gtcaccgccgtgtcgggcgacgagcgccccggcctcgatttctttccgctcacctgcgag
tacgtcgagaagacgttcgccgctggcaaaatcccgggcggattcttcaagcgcgaaggc
cggcagcgcgacgacgagattctgacgagccgcctcatcgaccgtccgtgccgccccctc
ttccccgagggcttcaagaaggacacgcagatcatcgcgaccgtcctcagctcggacaag
atcaacccgacggacgtgctcgcactcaccggcgccagcgccgcgctgcacatctccgac
atcccctgggccggccccctcgctggcgtgcgcgtcgcgcgcgttcacggtgagtttatc
gccttcccgaccttcgagcagcagtcccagtcggacatcgacatggtggtcgcgtgctcc
aaggacgccatcgtcatggtcgaaggcggcgccgccgaggccaacgagggcgacgtgctc
gatgccctctggttcgcgcacaaggctgcgcagccgatcctcgagctgatcgagcgcctg
cgcgccgcggttggcaaagagaagcgcgtcttcgaggcggtgaagctcgatgcgaagatc
gccgggcgcgtgaaggacctttccgacacgggcatcctcgagtccgcgctcatcaaagag
aagaagacgcgctacgactcgtacaagagcgtcaagacgaagctcaccgagacgctgctc
gcggaactcggggccgagacgttcgcggccaacgagaagctcatcaaagaggagttcgag
gagcgcaagtaccacgtcgtccgtgagtacgtcctcgggcagaacaagcgcatcgacggc
cgcgcgatggacgtcatccgtcccatcacgaccgaggtgggcttgctcccgcgcgttcac
ggctcggcgctcttccagcgcggtgagacgcaggcggtggtcacgagcacgctcggcacc
agcgccgacgagcaaaagatcgacgcgctcaccggcgaacgctggaagcgcttcatgctg
cactacaacttcccgcccttctccaccggcgagaccaagccgctacgcggccccggccgt
cgcgaagtcggccacggcgcgctcgccgagcgtgcactggctcggatgattccggagcag
gagaagttcccgtacacgatccgcgtcgtctcggagacgctcgagtcgaacggctcatcg
tcgatggccgcggtgtgcggtggcaccctctcgctgatggacgccggtgttcccatcaag
tcaccggtcgccggcatcgccatgggcctcatcgccgatgcggcgccgggccccaaccag
cgcacggccatcctgagcgacatcctcggtgacgaggaccacctcggcgacatggacttc
aaggtctgcggcaccgagcgtggcatcaccgccatccagatggacatcaagatcgcgggc
ctctcgcgcgagatcatgtcgcgcgcgctcgatcaggcgcgtgcgggccgcttgttcatc
ctgggcaagatgctcgagtcgctcaccacgccgcgcacggagctgtcgaagtacgccccg
cgcatcaccacggtgaaggtgaagcccgatcagatccgtctgatcatcggccccggcggc
aagaccatcaagggcatcatcgaccaaaccggcgtcgccatcgacgtggaagacgacggc
accgtgaatgtcgcctcgagtgattccgaggcggtgaagaaggcgctcgacatcatcaag
ggcctcaccgccgagccggaagtgggcgcggtctacaagggcgccgtgcagcgcgtgacc
gacttcggcgccttcgtcgagttgctcccgggcaccgacggcctgctccacatctccgag
atggcgcacacccgcgtggaacgcgtcaccgacgtgatgaaagaaggcgatgtcgtcgag
gtgaaggttctctccatcgaccgcgacggcaagatccgcctctcgcgtcgcgagctcctc
ccgctccccgagggcgaagagggcgagcgcgccaaggagcgcatgctggccgcccgcgaa
agcggcggtggcccgcccccgcgccgtggtggtggcggcggcgatcgcggtggtccgccg
cgcggcggcccccgaggcggcggcgaccgacgccgctaa
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