Pendulispora rubella: LVJ94_13375
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Entry
LVJ94_13375 CDS
T10973
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
prue Pendulispora rubella
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prue03032
]
LVJ94_13375
Enzymes [BR:
prue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LVJ94_13375
DNA replication proteins [BR:
prue03032
]
Prokaryotic type
DNA Topoisomerases
LVJ94_13375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
DEAD
Helicase_C
Toprim
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WXB08221
UniProt:
A0ABZ2LEM6
LinkDB
All DBs
Position
3316173..3319910
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AA seq
1245 aa
AA seq
DB search
MIAVLAEKPAVARDLARVLGATTRGEGFLRGGNYVVTWAIGHLVALAEPHQIDERWRSWR
LADLPMLPKEWPLEVLEGTRSQFDVVKRIINSREVEGVVCATDAGREGELIFRYVYEASK
CRKPVKRLWLSSLTPDAISRAFRELRPGAAFDSLARAAKARSRADWLVGMNLSRAYTVTH
DVLYSVGRVQTPTLAMVVARELEIRAFVPEDYLEIVATFGKADAEIDYRGLLFRVVQGEG
SKPKREAVRLPPDGEEAQQILERVRGGQARVESVERENHAMPPPRLYDLTELQRHANRLF
GMSAQRTLDVAQALYERWKLISYPRTDSRALSSSVAGTLRAVVDAIAPAYEGLLAPGTGQ
RPLGRRFVDDAAVTDHHAIIPTTVRADRDALSREELNIYDLICRRLLAAWHEDHRYATTT
VVTAVRSSEHVDRFMTTGTSVERVGWKVLDRKSTRSAGKDGREEPAPTVPPGLAQGMAVS
VEKVEAKPGRTRPPDHYTDATLLTAMESAGRTIEDKELSEAMRESGLGTPATRAATIETL
LAREYLERDKKVLHATDRGIALVEAVHPRVKSPVLTGEWERELRRLERGEGDFERFMRGI
EEFVTEVTGKVRAGGAVLSAGASASPNRSPSPNRTPTASPTPKPTPGRSPSPSPNRSQRP
RDLGALLGEVFGFGAFRPYQEEVCRTATEGKDVLLVMPTGSGKSLCYQLPGLARGGTTLV
ISPLIALMEDQVAKLKALGLAAERIHSGREREASRSACRAYLDGTLDFLFIAPERLRVPG
FPEMLARRKPALIAVDEAHCISHWGHDFRPDYRLLGERLPLLRPAPVMALTATATPLVQE
DIATQLGLTSQAAFIHGFRRTNLAIEVIEKNPKDRTAAVAKLLAKGERRPAILYAPTRKE
TEELAKTLARSAGFPVAAYHAGLPAADRAKVQTAFLGGKLEAVVATIAFGMGIDKPDVRT
VIHTALPASLEGYYQEIGRAGRDGKPSRAILFGSFVDRKMHEFFLDRDYPPLDIVQRLFD
ALSEGPRPKAWLATQVPETQFEKALDKLCALGAAIVEADETVRRGKGGWERAYEAQRKHR
AGQIEAMHRFTEKHVCRMLQLVRHFGDEQDDGEACGLCDVCAPKDAIAARFREPTAAEQR
AAERVLDALRQRDGLTVGQIHRDVFGTGKTMDRSSLEHVVGGLARAGLVSLADASFEKDG
ETIAFQRVHLVGRAPAPPAWEVRAASPRTPPTRVAGRKKRRRKRG
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgccgtgttggcggagaagcccgcggtggcgcgggatctggcgcgcgtgctcggc
gcaacgacgcggggggagggctttctgcgcggtggcaactacgtggtgacgtgggccatc
gggcatctggtcgcgcttgccgagccgcatcaaatcgacgagcgatggcggtcttggcgg
ctcgccgatctgcccatgctgccgaaagagtggccgctggaggtgctcgaggggacgcgg
tcgcagttcgacgtggtgaagcgcatcatcaattcgcgcgaggtcgaaggcgtggtctgc
gccacggacgccgggcgcgaaggggagctcatttttcgatacgtgtatgaggcgtcgaag
tgccgaaagccggtgaagcggctatggctttcgtcgctcacgccggatgccatttcgcgg
gcgtttcgcgaattgaggccgggggcggcgttcgattcgctggcgcgtgcggcgaaggcg
cgaagccgcgccgactggctcgtggggatgaacctgtcgcgggcgtacacggtcacgcac
gatgttttgtattccgtgggccgggtgcagacgccgaccttggccatggtggtggcgcgc
gagttggagattcgcgcgttcgtgcccgaggactatctggagatcgtggccaccttcggg
aaggcggatgcggaaatcgattaccgcggtctgctgtttcgtgtggtgcagggagagggg
agcaagccgaaacgcgaggcggtgcggttgccgcccgacggcgaggaggcccagcagatc
ctcgagcgcgtgcggggcgggcaggcgcgggtcgaatcggtggaacgcgagaaccacgcg
atgccgccgccgcggctctacgatctgacggagctgcagcgccacgcgaaccggcttttc
ggaatgagcgcgcagcgcacgctcgatgtggcgcaggcgctttacgagcggtggaagctg
attagctatccgcggacggacagtcgcgcgctttccagctcggtggcggggacgcttcgc
gcggtggtggatgcgattgcacccgcgtacgaggggcttttggcgccgggcacggggcag
cggccgttggggcgtcgtttcgtggacgatgcggcggtgaccgatcaccatgcgatcatt
ccgacgacggtgcgggcggaccgggatgcgttgtcgcgggaagaactgaatatttacgac
ttgatttgccggcggctgctcgcagcgtggcacgaggatcatcggtacgcgacgacgacg
gtggtgacggcggtgcggtccagcgagcatgtggatcgcttcatgacgacggggacgtcg
gtggaacgcgtcgggtggaaggtgctcgaccgcaaatcgacgaggtcggctggaaaggac
gggagggaggaaccggcgccgacggtgccgccggggctggcgcaggggatggccgtgtcg
gtggagaaggtggaggccaagccgggcaggacgcggccgccggatcactacaccgatgcg
acgttgctgaccgcaatggagagcgcggggcgcacgatcgaggacaaggagctgtccgag
gccatgcgtgagtccgggttggggacgccggcgacgcgtgccgcgacgatcgagacgctg
ctggcgcgggagtacctcgagcgggacaagaaggtgctgcatgcgacggatcgcgggatt
gcgctggtggaggcggtgcatccgcgggtgaagagtcccgtgctcacgggggagtgggag
agggagctccggaggttggagcgaggggagggggatttcgagaggttcatgagggggatc
gaggagttcgtgacggaggtgacggggaaggttcgggcggggggggcggtgctgagtgca
ggtgcgagtgcgagtccgaatcggagtccgagtccgaatcggacgccgacggcgagtccg
acaccgaagccgactccgggtcggagtccgagtccgagtccgaatcggagtcagaggccg
cgggatttgggggcgttgttgggggaggtgtttgggtttggggcgtttcggccttaccag
gaggaggtttgtcggacggcgacggaggggaaggatgtcctgttggtcatgccgacggga
tcggggaagtcgctttgttaccaattgcctgggctggcgcggggagggacgacgttggtc
atcagcccgctgattgcgttgatggaagatcaggtcgcgaagttgaaagcgctggggctt
gcggcggagaggattcactcggggcgcgagcgggaggcgtcgcggagtgcgtgtcgggcg
tatttggatggcacgctcgattttctcttcattgcgccggagaggctgcgcgtgcctggt
tttcccgagatgctcgcgcggcgaaagcctgcgctcatcgccgtggacgaggcgcattgt
atttcgcattgggggcatgattttcggccggactatcggctcctgggggagcgtctgccg
ctcttgcggccggcgcccgtgatggcgctcaccgcgacggcgacgccgctggtgcaagag
gacattgccacgcagttgggactgacgtcgcaggcggcgttcatccacggctttcggcga
acgaacctcgcgatcgaggtcatcgagaagaaccccaaggaccgcactgccgcggtggcg
aagcttttggccaagggcgagcggcgccccgcgatcctttatgcgcccacccgcaaggag
accgaggagctcgcgaaaacgctcgcgcgatcggcgggatttcccgtggccgcgtaccat
gcgggcttgcccgcggcggaccgcgcgaaggtgcaaactgcatttctcggcggcaagctc
gaggccgtggtcgccaccattgcctttggcatgggcatcgacaagcccgacgtgcggacg
gtcatccacacggcccttccggcgtcgctcgaggggtactaccaggagatcggccgcgcg
gggcgcgatggaaagccgtcgcgggccatcttgttcgggtcgttcgtcgaccgcaaaatg
cacgagttttttctcgaccgcgactacccgccgctcgacatcgtgcaacgcctcttcgac
gcgctgtccgaggggccgcggcccaaggcatggctcgccacgcaggtgccggagacgcag
ttcgaaaaggccctcgacaaattgtgtgcgcttggcgcggcgatcgtcgaggccgacgag
acggtgcggcgtggcaaaggcggctgggagcgcgcgtacgaagcgcagagaaagcaccgc
gcggggcagatcgaggcaatgcaccgcttcacggagaaacacgtttgccgcatgttgcag
ctggttcgccacttcggtgacgagcaggacgacggcgaggcgtgcgggctctgcgacgtg
tgcgcaccgaaggacgcgattgcggcgcgctttcgggagcccacggcggccgagcagcgc
gcggccgagcgcgtgctggacgcgctccggcagcgcgatggcctcaccgtcgggcagatc
caccgcgacgtgttcggtaccggcaagacgatggaccgctcctcgctggagcacgtcgtg
ggcgggcttgcgcgcgcgggcctggtttccctggccgatgcctcgttcgaaaaagacggc
gagaccatcgccttccagcgcgtgcacctggtgggacgcgccccggcgccgccggcgtgg
gaagtgcgcgccgcctctccgcgcacgccgccgacgcgcgtggcgggacggaagaagcgg
aggagaaagaggggttag
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