KEGG   Pendulispora rubella: LVJ94_35100
Entry
LVJ94_35100       CDS       T10973                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
prue  Pendulispora rubella
Brite
KEGG Orthology (KO) [BR:prue00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:prue02044]
    LVJ94_35100 (tssC)
Secretion system [BR:prue02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LVJ94_35100 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WXB02130
UniProt: A0ABZ2KYR2
LinkDB
Position
complement(9172165..9173727)
AA seq 520 aa
MEFTLRAFFWTKWPSISRKRRGPMTPRPDQSSSLATKRNPAVDRYIERILARVEQLALHD
EGIQRWAIDQLIAEIDRHVGAVLDNILHHEDFARLEASWRGLDYAVRHIDFSQNIELCWL
NCSKAELSKDFAQVENMASSGLFRIIHSSDYGMFGGRPFSTVFLQFPFDHGKEDVVLLQR
VAAVGAAAHVHVYVDAAPRLLGIDTFAAVPHMTAIEDVFNDGAHEEWNRFRDTAEARYLG
VLLPRVQLRIPHRRAGKPVRILAVDEHGDLVRDSRGNLLWTQTNPFVYQERIRDHRDLLW
GSPAYPLAVLFATHFATFRTSDDLFGTLDVPPPVTDHFPELGPRFPKPPVDVLISHETTV
TLARLGLQSVEFARWSSALQFNIGVSLHKPPTFALHEGGELATFEAWLGSMVSYTRIASR
YVHYLKVMERERIGANIGRLDIERELNEWIAQYVTSRSRISAVQRRKFPLAYARVQTFDT
NQEGVYRIEVKLRPHARVFGQLFELAAAWQSSPAPGRRAA
NT seq 1563 nt   +upstreamnt  +downstreamnt
ttggaattcacgctcagggccttcttctggacaaaatggccctctatatcacgaaagcgc
cggggaccaatgacgccgaggcctgaccagagcagctccttggcgacgaaacgaaaccct
gcggtggacaggtacatcgaacgcattctcgctcgcgtcgagcagctggccttgcatgac
gaaggcattcaacgatgggccatcgatcagctcatcgccgagatcgaccggcacgtgggc
gcggtgcttgacaacatcctccaccacgaggactttgcgcgcctcgaagcttcatggcga
gggctggactatgccgtgcgccacattgacttttcgcagaacatcgaactttgctggtta
aattgctccaaggcggagctctcgaaggacttcgcccaagtggagaacatggcttcatcg
ggcctatttcgaatcatccacagcagcgactacgggatgttcggggggcggccgttctca
acagtctttcttcagtttccgttcgaccacggcaaggaggatgtcgtgttgttgcagcgg
gtggcggccgtgggcgccgcggcgcacgtgcatgtctacgtcgatgcagcgccgcgtctg
ctcggcatcgacacgttcgccgcggtgccgcacatgacggcgatcgaggatgtatttaac
gatggcgcacacgaggagtggaaccgctttcgggatacggccgaagcgcgttacctcggc
gtccttctcccccgtgtacagctccgcatcccccaccgccgcgcaggcaagcctgtgcgc
atccttgcggttgacgagcacggagatctggtgagggacagccgagggaatctcctatgg
acccaaacgaatcccttcgtataccaggaacgcattcgcgatcatcgcgacctcctgtgg
ggtagcccggcttaccccctggcggtcctcttcgccacccactttgcgacgtttcgcaca
agcgacgatctcttcggcacgttggacgttccaccgcccgtgaccgaccactttcccgag
ctcggcccgagatttccgaagccgccggtcgatgtcctcatctcgcacgagacgaccgtc
acattggcgcgcctgggcctgcaaagcgtggaattcgctcgctggagcagcgctttgcaa
ttcaacatcggagtaagcctgcacaagccgccaacgttcgctctacacgagggcggcgag
ctggcgacattcgaggcttggctcgggagcatggtctcgtacacgcgcatcgcgtcgcgg
tacgttcactacctcaaggtgatggagagagaacgcatcggcgccaacatcggtcgccta
gacatcgagcgcgagctcaatgagtggattgcccagtacgtcaccagcaggtcgcgcatc
tcggcggtgcagcgacggaagtttccgctcgcatatgcgcgcgtgcaaacgttcgatacg
aatcaggagggcgtgtaccgcatcgaggtcaaactccggccacatgcgagggtatttggt
cagttgtttgagctggctgctgcatggcaatcatcgcccgcacccggaaggagagcagca
tga

DBGET integrated database retrieval system