Pendulispora rubella: LVJ94_36030
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Entry
LVJ94_36030 CDS
T10973
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
prue Pendulispora rubella
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prue03032
]
LVJ94_36030
03036 Chromosome and associated proteins [BR:
prue03036
]
LVJ94_36030
03400 DNA repair and recombination proteins [BR:
prue03400
]
LVJ94_36030
DNA replication proteins [BR:
prue03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LVJ94_36030
Chromosome and associated proteins [BR:
prue03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LVJ94_36030
DNA repair and recombination proteins [BR:
prue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LVJ94_36030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WXB02314
LinkDB
All DBs
Position
9385334..9385678
Genome browser
AA seq
114 aa
AA seq
DB search
MATRSDLTKARAEDVVKCVFDTMTAALGRGDGIEIRGFGSFSVRAYKAYEGRNPRTGEAV
PVPAKRLPFFKVGKELKELVNSSRHLPITGGSDSDGDDDLDDDLDDEDVDRDED
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcgtagcgacctcaccaaggcgcgcgcagaggacgtggtcaaatgcgtcttc
gacaccatgaccgctgcgctcggtcgcggagacggaatcgagattcgcggtttcggtagc
ttcagtgttcgagcctacaaagcctacgaggggaggaatccgcgcacgggcgaagcggtc
cccgtccctgcaaagcggcttccattcttcaaggttggcaaagagctgaaggagctggtc
aacagcagccggcacttgcccatcacgggcggatccgatagcgacggggacgacgatctc
gacgacgacttggacgacgaggacgtcgatcgcgacgaagattga
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