Pendulispora rubella: LVJ94_38990
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Entry
LVJ94_38990 CDS
T10973
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
prue Pendulispora rubella
Pathway
prue03030
DNA replication
prue03430
Mismatch repair
prue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVJ94_38990 (holA)
03430 Mismatch repair
LVJ94_38990 (holA)
03440 Homologous recombination
LVJ94_38990 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prue03032
]
LVJ94_38990 (holA)
03400 DNA repair and recombination proteins [BR:
prue03400
]
LVJ94_38990 (holA)
Enzymes [BR:
prue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVJ94_38990 (holA)
DNA replication proteins [BR:
prue03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVJ94_38990 (holA)
DNA repair and recombination proteins [BR:
prue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVJ94_38990 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
RelA_AH
CheB_methylest
Motif
Other DBs
NCBI-ProteinID:
WXB02881
UniProt:
A0ABZ2KZ83
LinkDB
All DBs
Position
10130432..10131490
Genome browser
AA seq
352 aa
AA seq
DB search
MTPSEAIAQAKQGKLLPLYVIVGEERFLRDEVVAAVRSAALGNGVAAFNEDKYTAGEADA
DAILSAARTVPMMAPKRFVLVRGIERWDSSGEGRSDDGDAKKLAPLDRFAEYAAAPIDST
CVVLTGDKIDGRKRLSTLGKKQGFIVACDVLGGRELPGWIRDRAAARGNPIDPDVAELLA
EIAGPELAHVNDAIERLALYAGEGKPITEEAVGECVARVRTADTWDLVAKVGARDLKGAL
AALADTYDPRDRGLPLLGALAWSIRQLAKFQAATESGASTDEAAKRAGVFQPFRARELAQ
RARGLRPKETDRWLLVLAETDLALKGSRRPPQAILEDMLTRLIASSGRAPRA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccgagcgaagccatcgcgcaagcgaagcaggggaagcttcttcccctgtacgtc
atcgtcggtgaggagcgcttcctccgcgacgaggtcgtggcggccgtgcgttcggcggcg
ctgggcaacggcgtcgccgccttcaacgaggacaagtacacggcgggcgaagccgacgcc
gacgcgatcctgtccgccgcccgcacggtgccgatgatggcgccgaagcgcttcgttctg
gtgcgcggcatcgagcgctgggactcttcaggtgaggggcggagcgacgacggcgatgcg
aaaaagctcgccccgctcgaccgattcgccgaatacgcggccgcgcccatcgactccacc
tgcgtggtgctcaccggcgacaagatcgacgggcgcaagcgcctctccaccctgggcaaa
aagcagggcttcatcgtcgcgtgcgacgttctcggaggccgcgagctgcccggctggatc
cgcgaccgcgccgcggcccggggcaaccccatcgatccggacgtggccgagctgctcgcg
gaaatcgcgggccccgagctggcacacgtgaacgacgccatcgagcggctggcgctctac
gcgggcgagggaaagcccatcaccgaggaagccgtcggcgaatgcgtggcccgcgtgcgc
acggccgacacatgggacctcgtggccaaggtcggcgcgcgcgacttgaagggcgcactc
gccgccctcgcggatacctacgatccacgcgaccgcgggctaccgcttcttggcgcgctg
gcgtggtcaatccgtcaattggcgaagtttcaggccgccaccgagtccggggcctctacg
gacgaggccgccaaacgtgccggggtcttccagcctttccgtgcccgcgagctggcccaa
cgggcgcggggcctccgccccaaggagaccgaccgctggttgctcgttttggccgaaacc
gacttggcgctcaagggctcgcgccggcccccacaggccattctagaggacatgttgacg
cgcctcatcgcgtcatccggacgcgccccgcgcgcataa
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