Pendulispora rubella: LVJ94_39860
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Entry
LVJ94_39860 CDS
T10973
Name
(GenBank) ATP-binding domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prue Pendulispora rubella
Pathway
prue03420
Nucleotide excision repair
prue03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LVJ94_39860
03430 Mismatch repair
LVJ94_39860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prue03400
]
LVJ94_39860
Enzymes [BR:
prue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVJ94_39860
DNA repair and recombination proteins [BR:
prue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVJ94_39860
MMR (mismatch excision repair)
Other MMR factors
LVJ94_39860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
UvrD-helicase
Viral_helicase1
AAA_19
AAA_22
AAA_12
NB-ARC
AAA_25
DEAD
ResIII
AAA_30
AAA_16
ADDB_N
SLFN-g3_helicase
NACHT
GvpD_P-loop
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WXB03051
LinkDB
All DBs
Position
complement(10345264..10347573)
Genome browser
AA seq
769 aa
AA seq
DB search
MPNVQPRPLTAAESKLVRDHEAFAASVRASVLEKAPSRSGGTEDRFAYARLRDEYAEAGE
EDRMALLAQMHETAARADARRAQEEELLPDLQAPYFAHMRLRTAGNVRDVLLGARPYVDT
GRAVTIVDFRRAPIAEAFFTCEPGDDYEIEVDRRTVEGVLEARHLVAFEKGAPAAITVEG
GALRRVRGEWHFEPGALVPDFSRVEGLPLAAEIDHAQREKGIAALLDADQRAVLERDPKE
TLLVLGAAGSGKTTVAIHRIAAIAERTPDFDPTAVLVLVPEVGLRHLARRMLTDLGLERV
HVRTFDEWIRGEARRVFPWIPEESPDAPAAVRRLKRHPGIFAAIDALVEDIVRGIGSRID
RLHAGRGAIREAIDAHREPVIEHRLRQAEKAVLGAASPAKQPLLKDAFREARRRLERVQA
DLHRLVGDRALLEHAVRAAKGQLAMPVLEQAVEHTRRQLDDPSAVRFAHVDAERLQTLDG
LSLDEDTPDAVAGTIDAEDYAILFELLFRKTGRSGTRAGALRRYRHLVLDEAQGLSPIEL
RVLGRALAPGGSATVAGDAAQRLGEGEAFASWDTLVSELGVHSTATHLETSYRCPRPILE
LAYAVLGDEAAGPMPAAAREGPAVLRTVLPGEGHAAVFISEALRSLARREPHAGVAVIAA
DAKSARAVHEVLARSLPARLVLDGDFAFAPGVEVTEVAQVKGLEFDYVILPDADARTYPS
DGEHRRKMHVALTRAVHQVWIVAPGALSPIFPMALAVPEALSWPMGRRT
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacgttcaaccgcggccgctcacggccgcagagtcgaagctcgtccgcgatcac
gaagcttttgccgcgtccgtgcgcgcgtcggtgctcgagaaggcaccgtctcgatcgggc
ggcacggaggaccggttcgcgtatgcgcgcttgcgcgacgaatacgccgaggccggcgag
gaggaccggatggcgctgctcgcgcagatgcacgagacggcggcgcgggccgatgcgcgc
agggcgcaggaagaggagctactgcccgatcttcaggcaccttatttcgcgcacatgcgt
cttcgcaccgcgggaaacgtgcgggacgtgctcctgggcgcgcggccgtacgtcgacacg
gggcgtgcggtgaccatcgtcgactttcggcgcgcgcccatcgccgaagccttttttacc
tgcgagccgggcgacgactacgagatcgaggtcgaccgtcgcaccgtggagggggttctc
gaggcgcggcatttggtggcgttcgaaaagggcgcgccggcggccatcaccgtggagggc
ggggcccttcgccgggttcgcggggagtggcacttcgagcccggcgcgcttgtccctgat
ttctcccgggtggaggggctgcctctggccgccgagatcgatcacgcccagcgcgagaag
ggcatcgcggcgctgctcgatgcggatcagcgcgccgtcctagagcgcgatcccaaggag
acgttgttggttctcggcgccgccggcagcggcaagaccacggtggccatccatcgcatc
gcggccatcgcggagcgtacgccggacttcgatcccaccgcggtgctggtgctcgtgccc
gaggtgggattgcggcacctcgcgcggcggatgctgacggatctcgggctcgagcgggtc
cacgtgcggaccttcgacgaatggatccgcggggaggcgcggcgcgtgttcccgtggatt
ccggaggagtcgcccgacgcgccggcggcggtgcgccggctcaaacggcatccggggatt
ttcgcggccatcgacgcgctcgtcgaggacatcgtgcgcgggatcggttcgcgcatcgat
cgactgcatgcggggcgtggcgcgattcgcgaggccatcgacgcgcaccgagagcccgtg
atcgagcatcgactgcggcaggcggaaaaggccgtgctcggggcggcgtcgccggccaag
cagccgctgttgaaggatgcctttcgcgaggcgcgccggcgcctcgaacgggtgcaagcg
gacctgcatcggttggtgggcgatcgcgcgctgctggagcacgcggtgcgtgcggccaag
gggcagttggccatgcccgttctcgagcaggcggtcgagcacacgcggcgccagctcgac
gatcccagcgcggttcggttcgcgcacgtcgacgcggagcgcttgcaaacgctcgatggc
ctttcgctcgacgaggatacgcccgatgcggtggcgggaacgatcgacgcggaagactat
gccatcttgttcgaattgctctttcgcaagacgggtcgctcggggacgcgggcgggggcg
ctccgccgttatcggcatttggtcctcgacgaagcgcagggactttcgcccatcgagttg
cgcgtgctcgggcgggcgctcgcgccgggcggtagtgcgacggtggccggcgatgctgcg
caacggctcggcgaaggggaggcgttcgcatcttgggatacgctcgtttccgagctgggc
gtgcactccacggcgacgcacctcgagacgtcgtaccgatgcccgcgccccattttggag
ctcgcgtatgccgtgttgggcgacgaggccgcggggcccatgcccgctgccgcacgcgag
ggacctgcggtgttgcgcaccgtgctgcccggcgaggggcacgcggcggtgttcatttcc
gaagccctgcggagcctcgcgcggcgtgagcctcacgcgggggtggcggtcatcgcggcg
gatgcgaagtcggcgcgtgcggtgcacgaggtgctcgcgcgctcgctgccggcgcgcctc
gtgctcgatggggacttcgccttcgcgccaggggtcgaggtgaccgaggtggcgcaggtc
aaaggcctggagttcgactacgtcatcctgccggatgccgacgcgcggacgtacccgagc
gacggcgagcatcgccgcaagatgcacgtggcactgacccgggccgtgcatcaagtgtgg
atcgtcgcgccgggcgcgctgtctcctattttcccgatggcgctggcggtgccggaggcg
ctgtcgtggccgatggggcgaagaacttga
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