Pendulispora rubella: LVJ94_47040
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Entry
LVJ94_47040 CDS
T10973
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
prue Pendulispora rubella
Pathway
prue00300
Lysine biosynthesis
prue00470
D-Amino acid metabolism
prue01100
Metabolic pathways
prue01110
Biosynthesis of secondary metabolites
prue01120
Microbial metabolism in diverse environments
prue01230
Biosynthesis of amino acids
Module
prue_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LVJ94_47040 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LVJ94_47040 (dapF)
Enzymes [BR:
prue01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LVJ94_47040 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WXB04447
UniProt:
A0ABZ2L0K2
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All DBs
Position
complement(12132020..12132871)
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AA seq
283 aa
AA seq
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MSRTLSFEKYQGIGNDFLVIDAEDDGVVSPELAAKLCDRRFGIGGDGVILVLPGGPSALA
RMRVLNADGSIPEMCGNGIRCMALHVARHHTRASRGERVLDATFETDAGPRRCHVELDGA
ENRAAEVTVDMGVVRIHGSRRLSLPGEKSEWSDIDLVEINVGNPHAVSLRRPTAEDIDRI
GPRLATHEAFPEGANIGFARVQDRSFIDLVVWERGVGLTLACGTGACAAVAAACSRDLAP
WGSPVTVRLPGGPLTIWVEGDGGRARMRGGAQHVFSGRVDVAG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcacgctatcgttcgagaaataccaggggattggcaatgacttcctcgtcatc
gacgcggaggacgacggcgtcgtctcgccggaactcgccgccaagctttgcgatcgccga
ttcggcatcggcggcgacggcgtgatcctcgtgctgcccggtggacccagcgcgctggcc
cgcatgcgcgtgctcaacgccgacggcagcatccccgagatgtgcggcaacggcatccgt
tgcatggcgctccacgtggcgcgtcaccacacgagggcctcgcgcggtgagcgcgtgctc
gatgccaccttcgagaccgacgccggcccccgccgctgccacgtcgaattggacggcgcc
gagaaccgcgccgccgaggtcaccgtcgacatgggcgtcgtgcgcatccacggcagccgg
cgcctttcgctgccaggcgagaagtccgagtggagcgacatcgatctggtcgagatcaac
gtgggcaatccgcacgcggtctcgctgcgaagacccacggccgaggacatcgaccgcatc
gggccgcggctcgccacgcacgaggccttcccagagggggccaacatcggctttgcccgc
gtgcaggatcgcagcttcatcgacctggtcgtgtgggaacgcggcgtcggactgaccctg
gcctgcggcaccggcgcctgcgcggcggtggctgcggcgtgctcgcgcgacctcgcaccg
tgggggagccccgtgacggtgcgccttcccggcggcccgctcaccatctgggtcgaggga
gacggagggcgggcgcgaatgcggggcggcgcccagcatgtgttctcggggcgggtcgac
gtcgccggatga
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