KEGG   Pendulispora rubella: LVJ94_48310
Entry
LVJ94_48310       CDS       T10973                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
prue  Pendulispora rubella
Pathway
prue02020  Two-component system
Brite
KEGG Orthology (KO) [BR:prue00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LVJ94_48310
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:prue02022]
    LVJ94_48310
Two-component system [BR:prue02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LVJ94_48310
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 Mg_chelatase AAA_5 AAA_16
Other DBs
NCBI-ProteinID: WXB04686
UniProt: A0ABZ2L172
LinkDB
Position
complement(12425297..12426646)
AA seq 449 aa
MIFVDDEASVRLAVKQWLGLVGIEVVLCASAREALSKLTSEDAVLVTDVKMPETDGIELL
RIAVQQDADRPVVLLTGHGDIAMAVEAMRSGAYDFVEKPFEPDRLAETIRRACDKWTLVL
ENRRLRAQLHGKVGIESRIIGTSPAIDALRRSVLDLASTHVNVVIRGETGTGKELVARCL
HDFGQRATHAFVAVNCGAIPETMFESEFFGHEVGAFTGAIARRPGKFEHANGGTLFMDEV
ESMPLALQVKVLRALQEHAIERLGSHKSIPVDVRTVSAAKVDLLDAVRAGRFREDLYYRL
DVAELHLPPLRERKEDIPLLFEFMASEAAALHGREPRPLSDADLRRLLAHDWPGNVRELK
NAAERHAIGIGAGVATVSPAAPSSAKAVDAPVRESLSAQVEQFERTCLERALEACRGDIK
ATMELLNLPRRTLNEKMARYGIDRRKFAR
NT seq 1350 nt   +upstreamnt  +downstreamnt
gtgattttcgtcgacgacgaggcgagtgttcgccttgccgtcaagcagtggctggggctg
gtgggaatcgaggtcgtcctgtgcgcctcggcgcgcgaggcgctgtcgaagctgacgagt
gaagacgcggtgctcgtcaccgacgtgaagatgccggagacggacgggatcgagctctta
cggatcgccgtccagcaagacgcggatcgacccgtcgtgctcctcacgggccacggcgat
atcgcgatggccgtcgaggcgatgcgcagcggcgcctacgacttcgtcgagaagcccttc
gagcccgaccgcctcgccgaaacgatacggcgcgcctgcgacaagtggaccctcgtgctc
gagaaccgccgccttcgcgcgcagctgcatggcaaagtcggaatcgaatcgcgcatcatc
ggcacctcgccggccatcgacgcgctccggcgctcggtcctcgacttggcgagcacccac
gtcaacgtcgtcatccgcggcgagaccgggaccggcaaagagctggtcgcgcgttgcctc
cacgatttcggccagcgcgccacgcacgcgttcgtcgcggtcaactgcggcgccattccg
gagacgatgttcgaaagcgaattcttcgggcacgaggtcggtgccttcacgggcgcgatt
gcgcgtcgcccaggaaaattcgagcacgcgaacggcggcacgctcttcatggacgaagtc
gagagcatgccactcgccctccaggtgaaggtgctccgcgccctgcaagagcacgccatc
gagcgacttggctcgcacaagagcatccccgtcgacgtgcgtacggtctccgccgcaaag
gtcgacttgctcgacgcggtgcgcgcggggcgtttccgcgaagacctctattaccgcctc
gacgtcgccgagcttcatttgccgccgctccgcgagcgcaaggaagatatcccgctcttg
ttcgagttcatggcctcggaggcggcggccctgcacgggcgcgagccgcgtccgctgagc
gacgccgacctgcgaaggttgctcgcgcacgattggccgggcaatgttcgtgaattgaaa
aatgccgctgagcgtcatgcgatcggaatcggcgcaggggtcgccacggtgagcccggcc
gcgccgtcgagcgcgaaggccgtcgatgcgccggtgcgcgaatcgctctccgcgcaggtc
gaacaattcgagcgcacatgcctcgagcgcgcgctggaagcctgtcgtggcgatatcaag
gccacgatggagctcctcaacctgccgcgtcgaacattgaacgagaaaatggcgcgctac
ggcatcgatcggcgaaagttcgcccgctga

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