Pendulispora rubella: LVJ94_50420
Help
Entry
LVJ94_50420 CDS
T10973
Name
(GenBank) hypothetical protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
prue Pendulispora rubella
Pathway
prue00300
Lysine biosynthesis
prue00470
D-Amino acid metabolism
prue01100
Metabolic pathways
prue01110
Biosynthesis of secondary metabolites
prue01120
Microbial metabolism in diverse environments
prue01230
Biosynthesis of amino acids
Module
prue_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LVJ94_50420
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LVJ94_50420
Enzymes [BR:
prue01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LVJ94_50420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WXB05098
UniProt:
A0ABZ2L557
LinkDB
All DBs
Position
12924122..12925489
Genome browser
AA seq
455 aa
AA seq
DB search
MTQSASLQPIYEPPAIVRHQMGAMNKFGRLHPQGMRPLTHIDGVNVDDLVREYGSPLFVF
SQRTLVNRYRELHEAFARRWARVRIAWSYKTNYLEAICRTFHKEGAFAEVVSPFEYDKAL
QSGVPADRIHWNGPYKPDAALERALAGKSIVHIDNFDELARIERLARKMNLRPKVAIRVN
MTIEGISSWSRFGLNLESGQAKEAVARLVSGDQLDLVGLHCHIGTFVLDPDAYGKAASKM
ARLANEIRAEHGIRLSFLDLGGGFASKNTLKAQYLHGEQASPSFARYADAICDGLAELDG
PAKELPTLVLETGRALVDDAGYLVASVEAQKRLPDGRRGLVLDAGVNLLFTSFWYKHDVV
PAQDFGAMLEPTVMFGPLCMNIDVVRDTIQFPAVSVGEKVVFRNVGAYNLTQWHQFIALR
PAVIMIGEGGRVGAIRRAEKLEDFTTVEAVPDWIV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagtccgcatcgctgcagcccatttacgaacccccggccatcgtgcgccaccaa
atgggggccatgaacaaattcggacgtctgcatccgcaaggcatgcgcccgctcacccac
atcgacggggtcaacgtcgacgacttggtgcgcgaatacggttcgccgttgttcgtcttt
tcccagcgaaccctggtgaaccgttaccgcgagctgcacgaggcgttcgcgcggcgttgg
gcgcgtgtgcgcatcgcatggtcgtacaaaacgaattacctcgaggccatctgccgcacg
tttcacaaggagggggcgtttgccgaggtcgtctcgccgttcgaatacgacaaggccctt
caatcgggggtgcccgccgaccggatccattggaacgggccctacaagccggacgcggcg
ctggagcgtgcgctggcgggcaagtccatcgtgcacatcgacaatttcgatgaattggca
cgcatcgaacgactcgcgcgcaagatgaacctgcgccccaaggtggccatccgggtcaac
atgaccatcgagggcatttcctcgtggagccgattcggtttgaacctggagtccggccag
gcgaaggaggccgtggcgcggctggtgagcggtgaccagctcgatttggtagggttgcat
tgccacatcggcacgttcgtcctcgacccggacgcgtatggcaaagcggcctcgaaaatg
gcgcgcctggccaacgagatccgcgcggaacacgggattcgcctttcctttctcgacctc
ggcggcgggtttgcctcgaagaacacgctcaaggcgcagtacctgcacggcgagcaggcg
tccccgtcgtttgcccgttacgccgacgcgatctgcgacggcctggcggaactcgacggc
cccgccaaagagctgcccacgttggtgctggaaacggggcgcgccctggtggacgacgcg
ggctacctcgtggccagcgtggaggcgcaaaagcgcctacccgacggccgccgcggcttg
gtgctcgacgccggagtgaaccttctctttacgtcgttttggtacaagcacgacgtcgtg
ccggcgcaagacttcggcgccatgttggagcccaccgtgatgttcggcccattgtgcatg
aacatcgacgtggtgcgcgacaccattcaattccccgccgtatcggtaggcgagaaggtc
gtgttccgcaacgtgggggcttacaacctgacccagtggcatcaattcatcgcccttcgc
ccggcggtgatcatgattggcgagggcggacgcgtgggcgccattcgccgggcggagaag
ctcgaagattttaccacggtcgaagccgtgccggactggatcgtatga
DBGET
integrated database retrieval system