Pendulispora rubella: LVJ94_52265
Help
Entry
LVJ94_52265 CDS
T10973
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
prue Pendulispora rubella
Pathway
prue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LVJ94_52265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prue03400
]
LVJ94_52265
Enzymes [BR:
prue01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LVJ94_52265
DNA repair and recombination proteins [BR:
prue03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVJ94_52265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
OB_YrrC
Viral_helicase1
AAA_11
HHH_5
AAA_22
Helicase_RecD
AAA_16
PIF1
NTPase_1
nSTAND3
AAA_28
SLFN-g3_helicase
UvrD-helicase
T2SSE
TraI_hel_assoc_N
NPHP3_N
AAA
AAA_29
DEAD
HHH_2
MeaB
ATPase_2
AAA_18
HTH_IclR
ATP_bind_1
RsgA_GTPase
NACHT
Zeta_toxin
KTI12
TsaE
AAA_24
cobW
ABC_tran
AAA_5
AAA_7
AAA_23
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
WXB05460
LinkDB
All DBs
Position
13389245..13391476
Genome browser
AA seq
743 aa
AA seq
DB search
MAKPVTMPLRARGAALTASHGGGDEVTLEGDIDRVTFESQDSGFRVVKLAREGAEPLTVV
GTFPQVTPGTRVRVRGRFERDRKHGEQLRALSVTELLPTTLVGVERYLGSGLIKGIGEGY
AKKIVAHFGMDTLRVLDEEPDRLAEVDGLGKKRSQTVATAWREQRAVRDVMVFLQAHGAS
GALAGRIYKRYGADAVRIVSTEPYRLAMDVWGIGFKTADRIAQELGVGSNSPARMQAGLL
QTLNDALEAGHTCVTVDEAVGRAMQLLGFDPDDASMAEHVREALRALVRGRYAVAELADG
EPLVFLTKMHAAEVRVARRLLELTRANARGLGGAAQAMTEFERAADVELAPEQRDAVSRA
AENPVLVVTGGPGVGKTTIVRAILSVLDREKLDVHLCAPTGRAAKRLAESTGQRASTVHR
LLEFEPKRGEFKRNRATPLECDALVVDEASMIDLPMADAITQALADGTRLILVGDVDQLP
SVGPGAVLRDVIASGAVPCVRLTQIFRQAEQSLIVQSAHRINMGEPPVASNRPDADFFLV
ERSSAEAARDTIVKLLTEHIPRRFGMDPRHDVQVLTPMHRGPAGTIVLNEALQAALNPSG
PQLTRGARTYRLHDKVMQLRNDYDREVYNGDVGIVIEVNAEQETLTVRYDEERKVVYEAG
DLDELALAYAVSIHKSQGSEYPAVVLPFVTAHFVMLSRNLLYTAVTRGKRLVVLVHDPRA
LSLALAEDRRGERRTRLQARLRG
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaacccgtgacgatgccgcttcgagcgcgtggcgcagcgctgaccgcatcgcac
ggcggaggcgacgaagtcaccctcgaaggcgatatcgaccgcgtcaccttcgagagccag
gactccggctttcgcgtggtcaagctcgcgcgggagggggcggaaccgctcacggtcgtg
ggcaccttcccgcaggtcacgcccggcacccgcgttcgcgtgcgcggccgcttcgagcgc
gatcgcaaacatggcgagcagctgcgcgcgctttccgtcaccgagctgctgcccacgacc
ttggtcggtgtcgaacgctacctcggctccggcctcatcaagggcatcggcgaagggtac
gcgaagaagatcgtcgcgcacttcgggatggataccttgcgcgtgctcgacgaagagccg
gaccgcctggcggaggtcgacggccttggcaagaagcgctcgcagacggtggccacggcc
tggcgcgaacagcgtgcggtgcgcgacgtgatggtctttctgcaggcccacggcgcctcg
ggcgcgctcgcgggccgcatttacaagcgctacggcgccgatgccgtgcgcatcgtctcc
accgagccgtaccgcctcgcgatggacgtgtggggcatcggcttcaagacggccgatcgc
atcgcccaagagctcggggtggggagcaactcgcccgcgcgcatgcaggccggtctcctg
cagaccttgaacgacgccctcgaggcgggccacacgtgcgtgacggtggatgaagccgtc
gggcgagcgatgcagctcctcgggttcgatcccgacgacgcgtcgatggccgagcacgtg
cgcgaggcgctgcgtgccttggtgcgcgggcgctatgcggtggccgagctcgcagacggc
gagccgctcgtgttcctcaccaagatgcacgccgccgaggtgcgcgtggcgcggcgcctg
ctcgagctcacgcgggccaacgcgcgcgggctcggcggtgccgcgcaggccatgaccgag
ttcgagcgcgctgccgatgtcgagctcgcgcccgagcagcgcgatgccgtgtcgcgcgcc
gccgaaaaccccgtgctcgtggtcaccgggggccccggcgtgggcaagacgaccatcgtg
cgtgcgatcctatcggtgctcgatcgcgaaaaactcgacgtgcacctgtgcgcccccacc
ggccgcgcggccaagcgcctcgcggaatccaccgggcagcgcgcctccacggtgcatcgc
ctgctcgagttcgaaccgaaacgcggcgagttcaagcgaaaccgcgccaccccgctggag
tgcgacgcgctcgtcgtcgacgaagcctcgatgatcgacttgcccatggccgatgccatc
acgcaggcgctggccgacgggacgcgtttgatcctcgtgggcgacgtcgatcagctcccc
agcgtgggccccggcgccgtcctgcgcgatgtcatcgcctcgggcgcggtgccctgcgtc
cggctcacgcagatcttccgccaggccgagcaaagcctcatcgtgcagagcgcccaccgc
atcaacatgggggagccccccgtcgcctcgaaccgccccgacgcggattttttcctcgtc
gagcgcagctcggcggaggcggcgcgcgacaccatcgtcaaactgctcaccgagcacatt
ccgcggcgcttcggcatggatccgcgccacgacgtgcaggtgctgacgccgatgcaccgc
gggccggcgggcaccatcgtcctgaacgaggccctgcaggcggcgctcaatccgagcggg
ccgcaactcacgcgcggtgcccgcacgtaccggttgcatgacaaagtcatgcagttgcgc
aatgactacgaccgcgaagtgtacaatggcgacgtcggcatcgtcatcgaggtcaacgcg
gaacaagagaccctcaccgtccgttacgacgaggagcgcaaagtcgtatacgaagccggc
gatctcgacgagctcgcgctggcgtatgccgtgagcatccacaaatcgcaggggagcgaa
tatccggcggtggttttgcccttcgtcaccgcgcatttcgtcatgttgtcgcgcaatctt
ctttacacagcggtcacccgtggcaaacgcctcgtcgttctggtgcatgatccgcgcgcg
ctttcgctcgcgctggccgaagatcgccgcggagaacgccgaacgcgcctccaggcgcgt
cttcgcggttga
DBGET
integrated database retrieval system
