Pyrgilauda ruficollis (rufous-necked snowfinch): 121348468
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Entry
121348468 CDS
T07608
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X5
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
121348468 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
121348468 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
121348468
NCBI-ProteinID:
XP_041313998
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MASPGLELGEVQPPAEPPQPELAFTEAQKWIEQVTGRSFGEKDFRSGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPGDLQDTSNRATIKNIDYS
RKLKNVLVTIYWLGKAANSCTSYSGSTLNLKEFEGFLAQMRKETEDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSETDLPHR
KMPDVKKDDMLARRTSHGEPKSAVPFNQYLPNKSNQTFYVPAPLRKKKAEREEYRKSWST
ATSPLGDRPFSKPHPETIEEELNETSGLCEKEKVGSMAPEASSLKNQLGVNQSEENSIDQ
SPSCSAKETSAPKEKDVEEIRKLRRLEQAGIKVMSAAQRYGSKKPICEDSGSTPDIILRK
DNPFMTHYQGKDSGSEDEAASRVPDLEKDDFATRRARMNQPKHIVPFNSFLVGPYTSKEK
GKPEDVKKPLQMEKKEHARRRRVHMTSVRQTVTSKESPLLQNEKTESEEEQQVKELDNER
DDLAKQKSQSILPQLQEDVLFVNASITKADLETWKRLKLSGEPRFGPRTAVSDDAESMSM
FDMRCEEDAVAQPHSKARHEKLQNIHNQLKEDETRWQDDLARWKSRRRSASQDLIKKEAE
RKKMERLLAGDGTNERRKSIKTYREIVEEKERRERELHEAYKNAKTQEEAESILQQYTER
FTISEAVLERLQMPKILERSHSVEPNSPLKDPNPLRYLRQQSLPAPKFTATIEATIVPTT
ELEPSSSTGRTSPSKSISKAVPMLTPKPYSQPKNTQEVLKNFKVDGKVSMNGENVNGTEE
KDKECTTVIFTPSPTRSLKFDGVARGDKSPAELKKEPPSVELSLQRPATQSVHKEPTASP
VELDGADSLQAEPSPSSVTPAPPECPSPDQKQFKSTAACSSPVVKRLEFLPSPVPSEENA
SSKKDVKKAETEQQKETELPSTQEAIKVKALEEKGSVVLPFLKKLPETSQVTLHNSSLQA
DSDTGDKSNRFNFWSWDPEEERKRQERWQHEQERLLQEKYQKEQYKLKEEWEKAQREVEE
EERRYYEEERKIIEDTVVPFIVSSNSAELLSSSSSTTEGNKTVSSIDSNSCPGEGKQKEI
TKQKKLLWEQDSMSSLKSKESELWQEKRSGNKVLSGYPATGILKGGSEQEHHMPVMERGS
PARLNLPLAQDDNVSWNQQLLTKRSPQCAEDVRQRPFLGQTVGQQPSSAGEARRAGYHEN
FRSGPSSPCSPAALSQSPNRSVSGKKLCSTCGLPLGKGAAMIIETLGLYFHIQCFRCGVC
KGQLGDAASGTDVRIRNGLLNCNDCYIRSRTAGQPTTL
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcctgggctggagctgggagaggttcagcctccggccgagcccccccagcct
gagctggccttcaccgaggctcagaaatggatcgagcaagtgacgggcagaagttttggt
gagaaagattttcgttctgggttagaaaacggcattcttctgtgtgagttgctgaatgcg
ataaagccaggattggtaaaaaagatcaatagactaccaacccccattgcaggtttggat
aatatcatattattcttaagaggctgcaaagaactgggacttaaagaatctcagcttttt
gatcctggtgatctgcaggacacatcaaacagagcaaccatcaagaacattgactatagt
aggaagctgaaaaatgtattagtcaccatttattggctagggaaagcagcaaacagctgc
acatcgtatagtggatcaaccctgaacctgaaggagtttgaaggcttcctggcacaaatg
agaaaggaaacagaggatattgagagccccaagcgcagcattcgtgacagcggctatata
gactgctgggactctgaacgcagtgattccctctccccgcctcgccacggcagagatgat
tcctttgacagtctggactcctttggctcccgctcgcagcagacaccatctccagatgta
gtgctcagagggagtagtgatgggagaggaagtgactcggaaactgacctgccacacaga
aagatgccagatgtgaaaaaagatgatatgttggcgaggcggacctcacatggtgaacct
aaatcagctgtgccttttaaccagtacctcccaaacaagagcaatcagactttctatgta
cctgctcctctgcggaagaagaaagctgagcgagaggagtaccgaaagagctggagcaca
gcgacgtcaccgctaggagacagacctttcagcaaaccccaccctgaaaccatagaagaa
gaactgaatgaaacatcaggattgtgtgaaaaggagaaagtgggctccatggctcctgaa
gcaagctcccttaaaaatcaattaggtgtaaatcaaagtgaagaaaactccatagatcag
tctccttcatgtagtgcaaaagaaacgtcagcgcccaaggagaaagatgtggaagagatc
agaaagttaagaagactggaacaagctggtattaaggtcatgtcagcagcccagcgctat
ggcagtaaaaagccaatatgcgaagacagcggaagcaccccagacatcatccttcgcaag
gacaaccccttcatgacacattaccaaggaaaggattctggttcagaagatgaagcagcc
agcagagttccagatttagaaaaggatgactttgccacccggagagccagaatgaatcaa
cccaagcacatagttccatttaactcctttttagtcggaccctatacaagtaaagagaaa
ggtaaaccggaagatgttaaaaagccattgcagatggaaaaaaaggaacatgcaagaaga
agacgggtgcacatgacatcagtaaggcaaacagttacaagcaaagagagcccacttctg
caaaatgagaagactgagtcagaggaggaacagcaggtgaaagagcttgataatgagaga
gatgatttggcaaaacagaaatctcaaagcatccttcctcagctacaagaagatgtgctt
tttgtcaatgcctctataacaaaagcagatctggagacctggaaaagattgaaactgtca
ggagagcccagattcggccccagaactgctgtgtctgatgacgcagagagtatgagtatg
tttgacatgagatgtgaagaagacgctgtggctcaacctcacagcaaagctcgccatgag
aagctgcagaatatacacaaccagctgaaagaggacgagaccaggtggcaagatgacctg
gctcggtggaagagtcgtcgaaggagtgcttcacaggatttgattaaaaaggaagctgag
agaaagaaaatggaaaggttattggctggagatggaacaaatgagcgcaggaaaagcatc
aaaacctaccgagaaatcgtggaggagaaagagagaagggagcgggagcttcatgaggca
tacaagaatgcaaagacacaggaggaggctgagagcatcctccagcagtacactgaaaga
ttcactatcagtgaagctgtccttgagcgtttgcagatgccaaaaattctagaaagaagc
cattcagtggaaccaaattccccactgaaagacccaaatcctctgagatatttaaggcaa
cagtcacttcctgctccaaaattcactgccacaattgaagcaaccattgttcccaccact
gaactagagcccagcagttcaacaggacgcacatctcccagcaaaagtatctccaaggct
gtgcctatgctgacacccaagccttattcacaacccaaaaatacacaggaagttctaaag
aactttaaggtagatggaaaagtcagcatgaatggagaaaatgtcaatggcacggaagaa
aaggataaagaatgtacaacagtaatatttactccttcaccaaccagatctctgaaattt
gatggagtagccagaggggacaagtccccggcagagttgaagaaggaacccccaagtgtt
gagctcagtttacagaggcctgccactcagagtgtgcacaaagagccaacagcctcccca
gtggaactggatggagctgacagcctgcaagccgagcccagccccagcagtgtgacacct
gcccccccggagtgcccatccccagatcaaaagcaattcaagtcaactgcagcttgttcc
agccctgttgtgaagagattagaatttcttcccagtcctgtcccttcagaggaaaatgct
tcaagcaagaaagatgtgaagaaagctgaaacagagcagcagaaggaaacagagctccct
tctacacaggaggcgattaaagtaaaagccctggaagaaaaggggagtgtagtgctgcca
tttttaaagaaactacctgaaaccagccaagttactctgcataactctagtctacaagct
gattctgatactggtgataaatcaaatcggttcaatttttggtcctgggatccagaagaa
gagcgaaagcgccaggaaaggtggcagcatgagcaagaacgcttgcttcaggagaagtat
cagaaggagcagtacaagctgaaagaggaatgggaaaaggcccagagagaagttgaagag
gaggagcgtagatactatgaggaggaacgaaagataattgaggatactgtagttccattc
attgtttcttcaaactctgctgagctcctctcctcttcttcctccaccactgaaggaaac
aagacagtgagctcaattgattcaaacagctgtccaggggaaggcaagcaaaaagaaatt
acaaagcagaaaaagctgctctgggagcaggacagtatgtcatctctgaaaagcaaggaa
agtgaactctggcaagaaaagaggagtggaaataaagtgctctcaggatacccagcgact
ggtatcctgaaaggaggaagtgagcaggagcaccacatgccggtgatggagcgcggctca
cctgccagactgaacctgccgctggctcaggatgacaatgtctcctggaatcagcagttg
ctgacaaagcgatctccacagtgcgcagaggacgttcgacagaggccgttcctgggccag
actgtgggacagcaaccaagctctgcaggggaagcaaggagggcaggctatcatgagaat
ttccgatctgggccatcatctccctgctctcctgctgctctcagtcagtcacccaacagg
tctgtcagcgggaagaagctttgttctacctgtggtctccctcttggaaaaggagctgcc
atgattattgaaacactcggtctttatttccatattcagtgcttcaggtgtggcgtttgc
aagggccagctgggagatgcagcgagtggcacggatgtcaggattagaaatggtcttctt
aactgcaacgattgttatatccgatcccgaactgctggacagccaactacattgtga
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